| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0663 |
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| Symbol | |
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| ID | 7309526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 767913 |
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| End bp | 768797 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643607603 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002505023 |
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| Protein GI | 220928114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTGA TTGAAGTTGT TAACGGAAAA ACACAGTTGT ATGGTGTTCT AGGGAATCCG
GTTCAACATA CAAAATCACC ATTTATTCAT AATACACTCT TTAAAGAATT CGAGATAAAT
GCAATATATT TACCTATTCA TGTTGACAAG GGAAAGTTGG AACAGGTTAT GGACGGATTC
AGGGCTATAA AGTTTTCAGG TTTTAATGTA ACTGTTCCAT TTAAAAAAGA CATTATAAAT
CATTTAGATG AGGTTTCTGC AGAAGGTAAG CTTATGGGTG CAATTAATAC TGTGATAAAC
AAAGATGGGA GATTCATAGG ATATAATACG GACGCAGAAG GGTTTGTAAG AGATTTTTCA
GATGGGTTTG AAACGACCTT TAAAGGAAAA CGGGTAATGC TGCTGGGAGC AGGGGGAACG
TCAAGGGCTA TTGCTGTCAG GCTTGCATCC GAAGGTATAG AGCATCTCAC CATAGTAAAC
AGGACAGAAG CCAACGCCCA AAGCATTTCT AATCTTGTAA ACAGCAATTT TGGAGACATT
GTGAGTACAA TACTGCCCGA GAAAGAAATA CTTGATAGAG AACTTGAAAA CAACCATATT
ATTGTAAATA CAACACCTGC AGGAATGAGT ACATATCTTG ATTCAACTCC TTTTGATTTA
GATTTTAACT TTAACGGAAC TCAGCTGGTA TACGATGTTC TGTATGTTCC CAAGAAAACC
AGATTCCTAG AACAGGCAGA AAAAACGGGA TGCAAAATCA GAAACGGATT TGGTATGCTG
ATAAATCAGG GCGTATCAGC TTTTGAGATT TGGACGGGTA TGCAGGTTGG AAGAGAACAG
ACTAATAAAC TACTGAAAAA AATAGAAAAT ATAGAGGTAT TTTGA
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| Protein sequence | MNLIEVVNGK TQLYGVLGNP VQHTKSPFIH NTLFKEFEIN AIYLPIHVDK GKLEQVMDGF
RAIKFSGFNV TVPFKKDIIN HLDEVSAEGK LMGAINTVIN KDGRFIGYNT DAEGFVRDFS
DGFETTFKGK RVMLLGAGGT SRAIAVRLAS EGIEHLTIVN RTEANAQSIS NLVNSNFGDI
VSTILPEKEI LDRELENNHI IVNTTPAGMS TYLDSTPFDL DFNFNGTQLV YDVLYVPKKT
RFLEQAEKTG CKIRNGFGML INQGVSAFEI WTGMQVGREQ TNKLLKKIEN IEVF
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