Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0593 |
Symbol | |
ID | 7309464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 684929 |
End bp | 685828 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607533 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002504954 |
Protein GI | 220928045 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000735687 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAG AGCGGATAAT CAGTGAGAAT GAAGCCAGAA AGACTCTTAA GCATGTGTTG AAGAACGGGC TTAAGCTTTC TGAAAGACTT ATAAGAAAAC TAAAATTACA ACAGAAGATT TATGTAAACG AACATCCCGA GAGAGTAAAC TATATTGTAA AGGCTGATGA CAGATTGAAG GTAATACTTG ACTTGGAGGA GGAATGTGAG CATATAGAAC CTCAGGATAT ACCTCTTGAC GTTATATACG AAGATGAATG TATGCTGGTT CTCAACAAGC AGTCGGGTAT AGTGGTACAT CCTACAAGTT ACCATCCCGA TAATACCATA GCCAATGGTA TTGTTTATTA TCTGAAACAG AAGGGTGTTA CCAAAAAGGT GCGGCCTGTC AGCCGTCTTG ACAGAGAAAC TTCAGGTATT ATTATTTTTG CAAAGAACCA GTTCACTCAG GAAATGCTCA TCCAGCAAAT GCATAACAAT CTGTTTAAAA AAGAGTATTT AGGTATTGTA CAGGGTATAC CCCAAAATAA CGAAGGCACT ATTAATCTAC CTATAGCTAG AAAGCCGGGC AGCATTATGC TTAGGCATAT TTCAGAGGAA GGAGCACCCT CAATAACACA TTACAAGATT CTTAAAACTT TCCCTTCACA TAATTCAGCC TTGTTGAGCT TTAAGCTTGA AACTGGCCGT ACACACCAGA TAAGAGTTCA TTGTAAGGCA ATGGGCTTTC CTATCTATGG TGACACTCTG TATTCAGATA ATACAAATTT ATTCATTTCC CGGCAGGCCC TCCATTCTTA CAGAACAGAG ATAATTCACC CTGTAACCCT AAAAGGAGTT ATATTCAAGG CTGAGCTTCC TTCCGACATA TCAGGACTTT TGGAAATACT AAGTAAATGA
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Protein sequence | MILERIISEN EARKTLKHVL KNGLKLSERL IRKLKLQQKI YVNEHPERVN YIVKADDRLK VILDLEEECE HIEPQDIPLD VIYEDECMLV LNKQSGIVVH PTSYHPDNTI ANGIVYYLKQ KGVTKKVRPV SRLDRETSGI IIFAKNQFTQ EMLIQQMHNN LFKKEYLGIV QGIPQNNEGT INLPIARKPG SIMLRHISEE GAPSITHYKI LKTFPSHNSA LLSFKLETGR THQIRVHCKA MGFPIYGDTL YSDNTNLFIS RQALHSYRTE IIHPVTLKGV IFKAELPSDI SGLLEILSK
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