| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0468 |
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| Symbol | |
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| ID | 7309345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 536575 |
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| End bp | 537912 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643607398 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002504830 |
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| Protein GI | 220927921 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAATAATTAT TGGTGTAAGC CTGGCTGTTG TTATAGTGGC ACTGATAGCC
GTGGGAGTTG TGAAAAATGC AGGATCAGTT GGTTCAGGGG CTGTTTTTGC AGTACAGACA
GGTGAAATAA AAAAAGGTGA TGTAAGTTCA TTTATTTCTG CAAACGGTAC AGTTTCTGAA
ATAGAAAAAT CCGAGGTATA CATAGATAAT CCTGTGAAAG TAACCAAACT ATATGTGAAG
CAGAATGACA CGGTTAAAAA GGGACAAAAG CTTGCAGATA TAGATGTGGA TGATTTGAAT
ACCCAGCTTG AAACTCAAAA GCTCCAGAAG AAAAGTCAGG AATTGCTTCT GAAGAAGGCT
AAGACAGCTG ATACTACAAT CAGTACTTTA AACCATCAGA ATGAAATTAC GGCAGCAGAA
AAAGATGTAG CTTCAAAACA GAGGGCATAT GAACAGGCTC TTAAAAACCG AAACGAGAAA
AAGGCTTTAT TTGATGCAGA CGCAATTTCA AAAGTTGAGC TGGATAGTGC TGAAAATACA
TTAAGAGATG CCGAGGATAT GTTGGGTGTT TCAAAATTAA CCCTTCAGGC GAAGAAAGAT
GCCCAGAATG AGACCAGTAA AACAAACAGT AAATCAAAAG CCGCCCAACA AATAGATATA
GAGTCACAGC AGGTTGCAAT ACAAACAACT GAAGTTGCAA TAAAGGACCT TGAAAATAAG
ATTAAGAAAT ATAAGGCTGC AATGTTCAGT ACAATGGATG GAGTTGTATC CCAGGTAAAC
GTTGCAGAGG GTTCATATAC AATGGCAGGT CAGCCTGTAT TTGTGGTTAT AAATCCTGAT
AAGTTGGAAG TTAAGCTTAG TATAAATGAG TTTAACGCAA AACTCATGAA ACCGGGACAA
GCCGTTGAAA TAAGCGGTGA TTCAATCCCA GACACAGAAA AAGTTACAGG TAAAGTTAAA
AGTGTAGCTC CAATGGCAAA AGCAAATACA ACCAATACCG GTTCGTCTGA AACGGTTATT
CCTGTAGTTA TCAGTTTTGA TTCGGTTACA CCTTCCATAA AGCCGGGAAT CACCGTAAGC
TGTGATATTA AGACTGTAGA TATTTCTAAT GTCCTTACAG TGGATCTGGA TATGTTGGGT
CAGGACAAGG ATGACAGTAA ATATGTATTT GTTATAAGTC CTGATAAAAA GACCATGCAG
AAAAAGAAAA TTGAGCTTGG CACTACTTCG GATATGAAAG CGGAATTGGT AGGCGGCGGA
TTAAAGGAAG GCGATCTGGT TGTTATGAAT CCAAATCCAG CTTATAAGGA TGGAGCCCGT
ATTAAAATTA AAGATTAG
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| Protein sequence | MKKKIIIGVS LAVVIVALIA VGVVKNAGSV GSGAVFAVQT GEIKKGDVSS FISANGTVSE
IEKSEVYIDN PVKVTKLYVK QNDTVKKGQK LADIDVDDLN TQLETQKLQK KSQELLLKKA
KTADTTISTL NHQNEITAAE KDVASKQRAY EQALKNRNEK KALFDADAIS KVELDSAENT
LRDAEDMLGV SKLTLQAKKD AQNETSKTNS KSKAAQQIDI ESQQVAIQTT EVAIKDLENK
IKKYKAAMFS TMDGVVSQVN VAEGSYTMAG QPVFVVINPD KLEVKLSINE FNAKLMKPGQ
AVEISGDSIP DTEKVTGKVK SVAPMAKANT TNTGSSETVI PVVISFDSVT PSIKPGITVS
CDIKTVDISN VLTVDLDMLG QDKDDSKYVF VISPDKKTMQ KKKIELGTTS DMKAELVGGG
LKEGDLVVMN PNPAYKDGAR IKIKD
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