| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0452 |
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| Symbol | polC |
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| ID | 7309331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 516268 |
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| End bp | 520569 |
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| Gene Length | 4302 bp |
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| Protein Length | 1433 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607382 |
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| Product | DNA polymerase III PolC |
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| Protein accession | YP_002504814 |
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| Protein GI | 220927905 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.2678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGTA CAAATAATAT AAATAGATTT TTATATGATT TATTCCCCGA TGCAATGGAT
TTTGACGGGG AATTTTCTGC ATTAAAGCAG CTAAAAGTTG AAAGAATGAG TGTTTTTATA
AAGGCGAACA GGCTTGAAAT ACATACTATA AGTTCTGATA TAGTAAGTAT TGCACTTATC
ATGAAAGCAG AAGAATGTCT CAAGCAAAAG CTTGGGGCAC CAAATCTTAC TCTAAAAGTC
AAATGCAGCA GGAGTTACAG CGTTGAGGAG TACCTGAGTA TTATGTGGAG TGAACTAATG
CAAATGCTTA CTTCAAAGGT GGCGTTGTGC AGGGGTATTC TACATGGCTC CAAATATGAG
ATTTCCGGCA ACAAAATAAT AATAAACCTG TTGACGTCGG GAGCAGACAT CCTAAAAGCA
CAAAATTGCC ATACAATGTT AGAACAACAT ATCAAGGGAA CCATTTGCCA AAGTGTAAAG
GTTGAATTTT GTGATATGCA TGTTGACCAT GTCATAATTG AGGAGTATGT TGCAGAAAAA
GTCAAGAATG AGGCAAAAGT AGTGAGCTCC GCAATAACTG CTCTGCCGGA AAATCAGAAA
CAGAAAAAGT ATGAATTCAA ATCCTACGGG TCAGGAGACA TGCCCTCCAA GGCAGTTATT
ACAGGAAAGC CTTTTACTGA TAGTATTATG AAGATATCCG AAGTAACACC TGATTCGGGT
AAGGTTGCTG TAGCTGGCGA AGTTTTCAGA ACAGAATACA GGGAAATCAG GGGCGGCAAA
TACATTTACA TATTTGATGT TACAGATTTT ACCAGTTCTG TTACTGTAAA AATGTTCTTG
GAAAAGAAGG ATTTCGGAAA TATTTCAGAG AGAATAACAG AAGGTGTCTG CTTACGTATA
CGTGGAGAAG CCCAGTATGA TAAATTTTCA AAAGAGCTTG CCATAATGGC TTTTGATATT
GTTGAAACAG AAAGGGAAAT AAGGCATGAC GATGCAGAAG AAAAAAGAGT TGAACTGCAC
CTGCATACAC AAATGAGTTC AATGGATGGA GTAACAGCAG TAAAGGACCT GGTAAAACGT
GCTGCGCAGT GGGGGCACAA GGCCATAGCT GTTACAGACC ACGGTATAGT TCAGGCATAT
CCCGATGCAT ATGCTGCATC CAAGAAAAAT AATATAAAAG TAATTTATGG TCTTGAGTGC
TATCTTCTGG ATGACAGTGT ACCTATAGTC TATGGCATTA AAGAACATTC TCTGGATGAC
GATTTTGTAG TATTTGACAT AGAAACAACA GGTTTAAACC CACAGCAGGA CAGAATTACT
GAAATTGGAG CAGTCAAGGT AAGAAACGGT CAAATTGTGG ACAGGTTCAG TGCTTTTGTC
AATCCGGGGG TTTCAATTCC AAGCTTCATA GTTAAGCTGA CAGGTATTAC TAACGATATG
GTTAAGGATG CACCTCCCAT AGAACAGGTT TTGAATGAGT TTATGGAATT TATACAAGGA
AGTGTTCTCG TTGCTCACAA TGCAAACTTT GATGTGGGCT TTATAAAGCA TAATGCGAAA
ATAATTGGAG AAAAAGTTAA AAACCCTTAT TTAGATACCT TGGAGCTTTG CAGGAAAATG
TTCCCTGAAC TTGGCAGGTA CAAGCTCAAT ATAGTTGCAA AGCATTTAAA GATTGAGTTA
GAAAATCATC ACAGAGCCGT AGATGATTCA ATGGCTACTG CAAAAATATT TATACATTGT
TTAAATGAAC TTAAAGAAAA AGGCTGTAAA AATATAAAGG ATATACAGAA TGCATTTGAC
GGAGAGGTTA ACCTTAAAGC CAGTTCTTAC CATGCTATTA TTTTAGTTAA GAACAAGGTC
GGCCTTAAAA ATCTGTATAA AATAGTATCT CAATCCCACC TGAAGTATTT ATACAAAAAG
CCAAGAGTAC CTAAAAAACT TCTAATGGAA TACAGAGAGG GACTTATTCT GGGAAGTGCT
TGTGAAGCGG GAGAACTGTA CAGAGCAATA CTTAACAACA AGAGTGAGGA TGAGATATCA
AAAATAGTTC GTTTTTACGA TTACCTTGAA ATACAGCCCT TGGGAAATAA CCAATTTTTG
ATAAACAATG GAAAGGTTTC TTCCCAGGAA GAGTTAAAAA AAATTAATAA AAAAATCATC
AGACTTGGTG AACGGCATAG AAAGCCTGTG GTTGCCACAT GTGACGTACA TTTTATGGAT
CCCAGGGATG AGGTATTCAG AAGAATATTA ATGTCAGGTC GGGGATTTAC CGATGCAGAT
AATCAAGCAC CGCTTTATTT CAGAACTACA GAAGAAATGC TTGAGGAGTT CAGCTACCTT
GGTGAGGAAA AGGCTCGAGA GGTGGTAATA GAAAATACCA ATCTCATCGC TGATATGATT
GAGAGCATCG CCCCGGTCCT TGAAGGGACG TTTCCGCCTA AGATCGAGGG TGCGGAACAA
GATATAGAGA ATATGGCAAT GAACAGAGCA AAAGAGATTT ATGGAGAAGA GCTGCCAGAG
GTTGTGGCAA AGAGACTTGA AAAAGAATTG AATTCCATTA TAAAAAATGG ATTTGCGGTT
ATGTATCTCA TAGCACAAAA GCTGGTTTCT AAGTCTCTAA ACGACGGGTA TCTGGTTGGT
TCTAGAGGGT CTGTAGGTTC CTCGTTTGTA GCAAATATGT CCGGGATAAC CGAGGTTAAT
TCTTTGCAGC CTCACTATGT ATGTGAGAAA TGCAAGTATT CCGAATTTAT ACTTGATGGC
TCCTATGACT GTGGATTTGA TTTGCCTGAA AAGGACTGCC CAAATTGTGG GAATAAACTT
AAAAAAGACG GTTATGATAT ACCATTTGAA ACATTTCTTG GTTTTGACGG TGACAAAGAG
CCTGATATTG ACTTGAACTT CTCGGGGGAT TATCAGCCTG TGGCACACAA ATATACAGAG
GAGCTGTTTG GAGAAGGTTA TGTATTCAGG GCAGGTACTA TAGCATCTGT TGCCGAAAAA
ACCGCATATG GCTATGTCAA GAATTATCTT GATGAAAGGA GCATAGTGGT AACAAACGCA
GAAATAAACA GACTGGTAAA GGGATGTACA GGCATAAAGA GAACTACAGG TCAGCACCCC
GGCGGAATAA TGATAGTACC AAAGGACAAG GAGATATTTG ACTTTTCGCC GATACAGAGA
CCTGCGGACG ATATAAAGTC AGAAATAATA ACCACACATT TTGATTACCA CTTTTTGCAT
GGAAGTATAT TAAAGCTTGA TATTCTGGGG CATGATGACC CTACCGTAAT CAGAATGCTT
GAGGATTTAA CAGGAGTCGA TGCAAGAACA ATCCCAATCG GTGAGAAAAA AACCATGAGC
TTGTTCAGCA GCACTGAAGC ACTAGGCGTA AAGCCTGAAG ATATAGGAAG TGAAACAGGA
ACCTTTGCAG TTCCGGAGTT CGGAACAAAG TTTGTAAGAC AAATGCTCCT TGACACCAAG
CCACAATCCT TTTCTGAATT AATTAGAATA TCTGGTCTTT CTCACGGAAC CGACGTTTGG
CTTAATAACG CCCAGGAGTT AATCAGAGAT GGGATTACTA CTCTTTCCCA GAGTATATGC
TGCCGTGACG ATATAATGAT TTATCTGATG CACGCAGGAC TTCCCCCAAA GACTGCCTTC
AAAATAATGG AGGATGTGCG TAAGGGAAAA GGTGTCAAAG AAGAATATGA AGCAATAATG
AAAGAAAATA ACGTTCCTGA CTGGTATATT CAATCATGTA AAAAAATAAA GTATATGTTC
CCAAAGGCCC ATGCAGCAGC ATACGTTATG ATGGCATTCA GAATAGCTTG GTTCAAGGTA
TATTATCCTG AGGCCTTCTA CGCAACATAC TTTACAGTAA GAGCCGATGA TTTTGATGCT
GAAATGATGA CTTACGGTCA GGACAAGGTA AGAAATAAAA TAAAAGAATT TGAAATGAAA
GGTAATAATA TTACTACAAA AGAGAAAAAT GTCCTTACTA TACTTGAGGT TGTAAATGAA
ATGTATGCCA GAGGAATAAA TTTCCTCCCA ATAAATTTGT ATCTTTCAGA GGCAACTAAA
TTCAGAATTG AAGATAAAAG TATAAGGCCG CCTATGAATG CACTTCAGGG GCTGGGAGGA
GCAGCGGCAC AGAACATTAT TGAGGCACGC AAAAACGGTG AATTCCTTTC AATTGATGAA
CTTAGGACCA GAGCAAAAAT AAGTAAATCG GTAATTGAAA TACTGGAAAG AAATAACGTG
CTGGAGGGAA TGCCGGAGAG TAACCAGCTT TGTTTATTTT AA
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| Protein sequence | MDSTNNINRF LYDLFPDAMD FDGEFSALKQ LKVERMSVFI KANRLEIHTI SSDIVSIALI
MKAEECLKQK LGAPNLTLKV KCSRSYSVEE YLSIMWSELM QMLTSKVALC RGILHGSKYE
ISGNKIIINL LTSGADILKA QNCHTMLEQH IKGTICQSVK VEFCDMHVDH VIIEEYVAEK
VKNEAKVVSS AITALPENQK QKKYEFKSYG SGDMPSKAVI TGKPFTDSIM KISEVTPDSG
KVAVAGEVFR TEYREIRGGK YIYIFDVTDF TSSVTVKMFL EKKDFGNISE RITEGVCLRI
RGEAQYDKFS KELAIMAFDI VETEREIRHD DAEEKRVELH LHTQMSSMDG VTAVKDLVKR
AAQWGHKAIA VTDHGIVQAY PDAYAASKKN NIKVIYGLEC YLLDDSVPIV YGIKEHSLDD
DFVVFDIETT GLNPQQDRIT EIGAVKVRNG QIVDRFSAFV NPGVSIPSFI VKLTGITNDM
VKDAPPIEQV LNEFMEFIQG SVLVAHNANF DVGFIKHNAK IIGEKVKNPY LDTLELCRKM
FPELGRYKLN IVAKHLKIEL ENHHRAVDDS MATAKIFIHC LNELKEKGCK NIKDIQNAFD
GEVNLKASSY HAIILVKNKV GLKNLYKIVS QSHLKYLYKK PRVPKKLLME YREGLILGSA
CEAGELYRAI LNNKSEDEIS KIVRFYDYLE IQPLGNNQFL INNGKVSSQE ELKKINKKII
RLGERHRKPV VATCDVHFMD PRDEVFRRIL MSGRGFTDAD NQAPLYFRTT EEMLEEFSYL
GEEKAREVVI ENTNLIADMI ESIAPVLEGT FPPKIEGAEQ DIENMAMNRA KEIYGEELPE
VVAKRLEKEL NSIIKNGFAV MYLIAQKLVS KSLNDGYLVG SRGSVGSSFV ANMSGITEVN
SLQPHYVCEK CKYSEFILDG SYDCGFDLPE KDCPNCGNKL KKDGYDIPFE TFLGFDGDKE
PDIDLNFSGD YQPVAHKYTE ELFGEGYVFR AGTIASVAEK TAYGYVKNYL DERSIVVTNA
EINRLVKGCT GIKRTTGQHP GGIMIVPKDK EIFDFSPIQR PADDIKSEII TTHFDYHFLH
GSILKLDILG HDDPTVIRML EDLTGVDART IPIGEKKTMS LFSSTEALGV KPEDIGSETG
TFAVPEFGTK FVRQMLLDTK PQSFSELIRI SGLSHGTDVW LNNAQELIRD GITTLSQSIC
CRDDIMIYLM HAGLPPKTAF KIMEDVRKGK GVKEEYEAIM KENNVPDWYI QSCKKIKYMF
PKAHAAAYVM MAFRIAWFKV YYPEAFYATY FTVRADDFDA EMMTYGQDKV RNKIKEFEMK
GNNITTKEKN VLTILEVVNE MYARGINFLP INLYLSEATK FRIEDKSIRP PMNALQGLGG
AAAQNIIEAR KNGEFLSIDE LRTRAKISKS VIEILERNNV LEGMPESNQL CLF
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