Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0451 |
Symbol | |
ID | 7309330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 515132 |
End bp | 516193 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607381 |
Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
Protein accession | YP_002504813 |
Protein GI | 220927904 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00180627 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGATT GTATAAAAAG AAATCAAACC AAAAAAATAA AGGTTGGAGA TATCTTCATA GGCGGAGATT CTCCAATCTC CGTTCAATCC ATGACCAACA CTGATACAAG GGATGTTAAG GCTACTATCC ATCAAATTAA AAGTCTTGAA GAGGCTGGGT GTGATATAGT CAGATTAGCA ATTCTGGATA ATGAAGCTGC AACAGCCATA GGCGAGATAA AAAAGCATGT AAAAATTCCT CTAGTTGCGG ATATCCATTA TGATTACAGA CTTGCAGTTG AATGTATGAA AAACGGTGTT GATAAAATAC GTCTAAATCC AGGTAATATC GGAGGCAATG ACCGAGTCAG AACAGTGGCA GGCATGGCAA AGGAGAGGGG AATTCCTATC AGAATCGGTG TTAATTCCGG TTCGGTAGAG AAGAGAATTC TGGAAAAATT CGGTGGTGTA ACTGCGGAAG GCATGGTAGA AAGTGCTTTG GCACACGTAG CTATGCTGGA AAATGTTGAT TTTAATGACA TAGCGATTTC TATTAAGGCC TCTAGCGTAC CGATGACAAT AGCTGCTTAC AGATTGCTCT CTGAAAAATG CTTATACCCT TTACATGTTG GAGTTACAGA AGCGGGAACA GTTTATAAGG GAACTATAAA ATCAGCAGTT GGTATAGGAT GCCTTCTTGC AGAAGGTATC GGTGATACTA TCAGAGTTTC ATTGACAGGG GACCCGGTTG AAGAGATAAA AGTTGGAAAG CAGATACTTA AGTCTCTGGA TTTATTAAAA GAAGGTATAG AGATTGTTTC ATGCCCTACC TGCGGTAGGA CTCAAGTTAA CCTTATAGAT ATAGCAAACA GCATAGAACC TCTACTGGAA AAGTTAAATA AAAATATCAA GGTAGCGATT ATGGGATGTG CTGTAAATGG ACCCGGTGAA GCTAAAGACG CTGATATTGG TATTGCGGGT GGTGTAAACG AAGTTTTACT ATTTAAAAAA GGTCGTATAA TCAGAAAAAT TCCTCAGGAA AACGTCGTTG AGGAATTAAT AAAAGAGATA AGTGAAATGT AG
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Protein sequence | MEDCIKRNQT KKIKVGDIFI GGDSPISVQS MTNTDTRDVK ATIHQIKSLE EAGCDIVRLA ILDNEAATAI GEIKKHVKIP LVADIHYDYR LAVECMKNGV DKIRLNPGNI GGNDRVRTVA GMAKERGIPI RIGVNSGSVE KRILEKFGGV TAEGMVESAL AHVAMLENVD FNDIAISIKA SSVPMTIAAY RLLSEKCLYP LHVGVTEAGT VYKGTIKSAV GIGCLLAEGI GDTIRVSLTG DPVEEIKVGK QILKSLDLLK EGIEIVSCPT CGRTQVNLID IANSIEPLLE KLNKNIKVAI MGCAVNGPGE AKDADIGIAG GVNEVLLFKK GRIIRKIPQE NVVEELIKEI SEM
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