| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0437 |
|---|
| Symbol | |
|---|
| ID | 7309319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 500544 |
|---|
| End bp | 501503 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643607367 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002504799 |
|---|
| Protein GI | 220927890 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0271798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTA AAAAGTCTAT TGTAGCTGCT TTGATTTTTG GACTAATTGC AGGTACTGCA
GCCTGCGGAA ATTCCGGCGG TGTCAAAGAA TCCGGTTTAT CAAATATAAA AACCATAAAA
ATTGCCTACC TTCCTTTAAC ACATGCTTTG CCTGTGTTTG TGGAGAAAGA ATTGCAGGAT
AAAAAAGAGA ATAAATATAA AATTGAGCTA GTCAAATACG GGTCATGGCC CGAACTGATG
GATGCCCTTA ATACAGGCCA TGTCGACGGT GCTTCCGTTC TTATTGAGCT TGCCATGAAG
GCAAAGGAAC AGAGTATCGG AGTCAAGGCG GTTGCACTGG GTCATAAGGA TGGAAACGTA
ATTGTTGTTT CCAAAAACAT TAAAAGTCCG TCGGATTTAA AGGGAAAGAA TTTTGCCATT
CCCCACAGAC AATCCTCCCA TAACATCCTT TTGGGACAAA TGCTCAAAAA TGTCGGACTT
TCCTACAAGG ATGTAAACAT AGTTGAGCTT CCTCCTCCTG AAATGCCAGC GGCTCTTGCT
CAAGGTCAAA TAGCCGGATA TAGTGTTGCC GAACCATTTG GAGCAAAGTC TATTGCCCTT
GATACAGGAA AGGTATTGTT TGAATCCAAT GAACTCTGGA AGGATTCCAT TTGCTGCTCT
CTGGTTTTGT CCGACAAATT TATTAACAGC AACAAGGATG TGGCAAAAGA GGTTGTATCC
AGTTTTAGAG ATGCAGGTGA ATACATTGGT TCTCACAAGG ATGAGGCTAA TGCTATTGCA
AAGAAATACC TTAATCTTGA CGATAAGGTT CTGACCCTGT CCTTAAAATG GATTTCATTC
AACGACCTCG AAATTACCAG AGAAGCATAT GACAGCCTTA CTTCTAAAAT CAAGGAATTC
GGGATTTCCT CAAATCCTCC GGCTTATGAT GACTTTGTAG ACTCTAGCCT TTTACGGTAA
|
|---|
| Protein sequence | MSIKKSIVAA LIFGLIAGTA ACGNSGGVKE SGLSNIKTIK IAYLPLTHAL PVFVEKELQD
KKENKYKIEL VKYGSWPELM DALNTGHVDG ASVLIELAMK AKEQSIGVKA VALGHKDGNV
IVVSKNIKSP SDLKGKNFAI PHRQSSHNIL LGQMLKNVGL SYKDVNIVEL PPPEMPAALA
QGQIAGYSVA EPFGAKSIAL DTGKVLFESN ELWKDSICCS LVLSDKFINS NKDVAKEVVS
SFRDAGEYIG SHKDEANAIA KKYLNLDDKV LTLSLKWISF NDLEITREAY DSLTSKIKEF
GISSNPPAYD DFVDSSLLR
|
|---|
| |