| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0429 |
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| Symbol | |
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| ID | 7309311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 492172 |
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| End bp | 494757 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607360 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002504792 |
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| Protein GI | 220927883 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAG TGACAAAAAT GAGAAAGGTT GGGGCATTAG TTGTAGGATC TGCATTACTT
TTTACAACAA TGGTTCCTAC AAGCATCTTT TCTGCGGCTG CCAGTGACGC AATAAACGTA
AGTATAGACA CAACGGCTGA GAGAGCTGCA ATTAGTCCCT ATATTTATGG TGGAAACTGG
GAATTCAATA ATGCAAAGTT AACTGCAAAA AGATTCGGCG GTAACAGAAC AACCGGTTAC
AACTGGGAAA ACAACTACTC AAATGCAGGT AGTGACTGGC AGCAATCCAG TGACACCTAT
ATGTTGACAA GCAACAAAAT CCCCGAAGAC AAATGGAGTG AACCGGGTGT AGTAATAACT
GATTTTCATG ACAAAAACCT TGCAGCCGGT GAACCGTACT CATTGGTAAC ATTGCAGGCA
GCCGGATATG TTTCTGCAGA TGCAAACGGA ACTGTAGCAG AAGATGAAGT AGCACCGTCA
GAAAGATGGA AAGAAGTAAA ATTCAAAAAG GATGCTCCGT TATCACTTAC TCCTGATACA
ACTGATAATT ATGTGTACAT GGATGAATTG GTAAACTTAC TTGTTAATAA GTATGGAAGT
GCCTCTACAG CCACAGGAAT AAAAGGGTAT GCTATTGACA ATGAACCGGC TCTCTGGTCA
GGTACACATC CTAGAATGCA TCCTAATAAC GCAACCTGTG CAGAGGTAAT AGACAAGAAT
ATCAACCTTG CAAAAACTGT AAAAGGTGTT GACCCAAGTG CAGAAACTTT CGGTCTTGTA
GCGTATGGCT TTGCTGCATA TAATGATTTT CAGTCTGCAA CTGATTGGAA GGATTTGAAG
GGCAATTACA CATGGTTCCT TGATTATTAT CTTGACAGCA TGAAAAAGGC TTCAACTGAA
GCAGGAACCC GTTTGATAGA TGCTCTCGAC CTGCACTGGT ATCCTGAGGC AAAAGGTGGA
GGACAAAGAA TATGTTTTGG TGAAGACCCA ACAAATATAT TATGTAATAA AGCACGTCTA
CAGGCAGCCA GAACATTATG GGATCCTACA TATAAAGAAG ACAGCTGGAT AGCACAGTGG
TGCAGCTTCG GACTTCCTTT GATTCCAAAG GTACAGGAAT CCATAGACAA ATACAATCCA
GGAACAAAGC TTGCATTTAC AGAGTATTCA TATGGTGCTG ACAACCATAT AACCGGAGGT
ATAGCAGAAG CTGATGTATT GGGTGTATTC GGCAAATACG GTGTTTACCT TGCAACTGTT
TGGGGCGGCG GAAGCTATAC CGCAGCAGGT GTAAACATTT ATACCAACTA TGACGGAAAT
GGCTCAAAAT ACGGCGATAC AAAGGTAAAA GCTGAAACAT CAGATGTAGA AAACAGCTCT
GTATATGCTT CTGTTGATTC AAAAGACGAT TCTAAATTAC ATGTTATTTT AATAAACAAA
AATTACGATA GTCCTATGAC CGTTAACTTT GGTATAAACA GCGACAAGCA GTATACATCA
GGAAGAGTAT GGTCATTTGA CAGAAGCAGT GCAAACATAA CAGAAAAAGA TGCTATAGAT
GCTATAAGCG GTAACAAATT AACTTACACA ATACCTGCAT TAACCGTATG TCACATAGTT
CTCGACTCAA GTGCTCAGAC AACACTTTAC GGAGATGCAA ACCATGATGA AACAGTAGAT
GCTATAGATT ATGCATATTT TAAGAAAATT TTATTAAATC CTGATTCAGA ATATGACAAA
ACTTGTGATT TAAATCTTGA TAACGCTGTT GATGCAGTTG ATTTTGGAAT ATTAAAACAA
TACCTTCTTG GAAAAATTCA AAGCTTACCT TATAAAACAA TAACAGAAAA CAAACCGCCG
GTAGCTGCTT TTACAGTATC ACCCAAAGAA GCGTTTACCG GAGATAATAT AAATTTTGAT
GCAACAGCTT CAACTGACCC TGACGGAAAT GTTCACATTT ATTCATGGGA CTTCGGTGAT
GGTACAGAAG GTTCCGGAGC AAATATTACT CATAAGTATA AAGCACCTGG AACATACACA
ATAAAATTGA CAGCCTTTGA TGAAAAAGGT TTATCAAATT CAGTTACAGA TACAGTTACC
ATAACATCCG CCACAGGTGA TAATGCAGAT GTCAACTTTG AGGATGGAGA ATTAAACGGT
TTTATAACAA ATGACGCTAC AATTACTACT TTGTCAGTAA CCTCTGATAA GGCTTTCCAG
GGAAACAAGT CTCTCAAATG GGACGCTGTA GGTTCAAAAG ACGGTAAAGT GGACGCTGAA
ATAAACAGCA GTGTACATGT TCTAAAACCA GGACAAACAA TGACATTCAG AATTTGGATT
CCTGAAGGAG CTCCAATCAA ATCAATTCAG CCATACTATA TGCCACACAA CGCTGATTGG
ACAGCAGCAG AATGGAATTC TTCATGGAAG GGCTACGACA TGGTAAAGAA GGGTGACTGG
AATGAATTTA CAGTAACACT TCCTCTTACT ACAGATGTAA CTTTAACCGA GTGCCAGTTT
GGTATACAAG TTGAAACATC TGCGGAAGGT AACTTTACAA TGTATGTTGA TTCAATTGAT
TGGTAA
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| Protein sequence | MAKVTKMRKV GALVVGSALL FTTMVPTSIF SAAASDAINV SIDTTAERAA ISPYIYGGNW
EFNNAKLTAK RFGGNRTTGY NWENNYSNAG SDWQQSSDTY MLTSNKIPED KWSEPGVVIT
DFHDKNLAAG EPYSLVTLQA AGYVSADANG TVAEDEVAPS ERWKEVKFKK DAPLSLTPDT
TDNYVYMDEL VNLLVNKYGS ASTATGIKGY AIDNEPALWS GTHPRMHPNN ATCAEVIDKN
INLAKTVKGV DPSAETFGLV AYGFAAYNDF QSATDWKDLK GNYTWFLDYY LDSMKKASTE
AGTRLIDALD LHWYPEAKGG GQRICFGEDP TNILCNKARL QAARTLWDPT YKEDSWIAQW
CSFGLPLIPK VQESIDKYNP GTKLAFTEYS YGADNHITGG IAEADVLGVF GKYGVYLATV
WGGGSYTAAG VNIYTNYDGN GSKYGDTKVK AETSDVENSS VYASVDSKDD SKLHVILINK
NYDSPMTVNF GINSDKQYTS GRVWSFDRSS ANITEKDAID AISGNKLTYT IPALTVCHIV
LDSSAQTTLY GDANHDETVD AIDYAYFKKI LLNPDSEYDK TCDLNLDNAV DAVDFGILKQ
YLLGKIQSLP YKTITENKPP VAAFTVSPKE AFTGDNINFD ATASTDPDGN VHIYSWDFGD
GTEGSGANIT HKYKAPGTYT IKLTAFDEKG LSNSVTDTVT ITSATGDNAD VNFEDGELNG
FITNDATITT LSVTSDKAFQ GNKSLKWDAV GSKDGKVDAE INSSVHVLKP GQTMTFRIWI
PEGAPIKSIQ PYYMPHNADW TAAEWNSSWK GYDMVKKGDW NEFTVTLPLT TDVTLTECQF
GIQVETSAEG NFTMYVDSID W
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