| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0411 |
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| Symbol | |
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| ID | 7309294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 468358 |
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| End bp | 469953 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643607343 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002504775 |
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| Protein GI | 220927866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCAAC TAACTCAGAA GAGAAAAACC ACAGTTATGA TAGCACTAAT GGCTACCATG
TTTTTCGCAG CAATAAATCA AACAATAATA AGTGCTGCAT TGCCAAAAGT TATTGCCCAA
TTAGGAGGAA TGGATTACTA CTCATGGGTA ATTACTGGTT ACATGCTTAC CTCAACAATC
TCTACTGTTA TATTTGGAAA GTTATCTGAT ATCTATGGAA GAAAGATATT TTTGCTATCA
GGAATTATTA TCTTCTTAAT AGGTTCTTTT TTAACCGGCT TGTCAGCTAA TATTTTTCAA
ATGATAGCAT TTCGTGGGAT TCAAGGAATT GGTGGAGGCA TTTTAATGTC AATTTCACTT
ACAGCTGTAG GTGATTTATA CCCACCACAA GAAAGAGCTA AGTGGACAGG TGTTATGATG
TCGATCTTTG GTATTTCCAG CATCCTCGGA CCAGTTCTTG GAGGCGTTAT GGTTGATTAT
GTCGCATGGA AATGGTTGTT TTGGATATTT CTTCCCCTAG GTGTCATTGC CCTAATCATG
ATTTGGAGCC TGTTTCCTAA ACTATCGGGG AATTCCTCTG AATCAATTGA TTATTTGGGC
TCAATTTTCC TGGCACTTTC AATTACCAGC TTACTTTTGG GATTCTCATG GGCTGGGACA
AAATATGCTT GGGCATTACC ACAAAGTTTA GGTCTCTTTG CTGCAACTTT AGTGGGAATT
TTAGTTCTTA TTCTTATTGA ACGCAATGCC AAAAGTCCCG TTATGCCCCT TTCTATGTTT
AAAAACAAGG GTGTGACTAT TTCTTTCGTA GCAAGTTTTG TTATGAGTGG TGGAATGATG
GGTGCTATGT CATATATCCC ATTCTTTATC CAGGGTGTAA AAGGGCATTC AGCAACAACA
TCCGGTTTAT TGAATATCCC AATGTCTCTT ATGATGATCA TTTTTAGTAC ATTAGTGGGG
CGTTGGATGT CAAAATATGG TAATTATAGG TTGTTTGCAG TGCTTGGTTT AGGTATAATG
AGTGCAAGTA TGATTATAAT GGCAAATATG AATAACATTG TATGGGCTGC CATAAGCTTG
ATTATTTTTG GTGTAGGTCT GGGATTCGGT ATGACAGTAT TTACAACAAC AGCCCAGAAT
TCAGCTCCTA CTTCACAGCT CGGTGTAGTT ACAGCTTCTT GTACACTATT TCGTAATCTG
GGAGGTACCA TTTTCATTGC AATATTTGGT TCTATCATGA ATACATCAAT GGCAAGAAAT
ATGGAAAAAG TAATGTCCTC CGGCTCTGGA ATAGATCTTA CAAAACTAGA TGTTGAAACT
GCAGAAAAAT TTAAAGCTAT GGCTAATCCT CAATTATTGC TGGATAATAC TAAACTTGAA
GCGATACAAG CGAGCATGCC TGAACAAGTT CAGCTGTTAT TTTCAAAGGT GATGGACTTA
GTCAGAACTG TAATGGGCGA TGCATTAACA AGTGTATTTT ATATAGGTGC TTTACTCTTG
CTTGTGGGTG TTGTACTTTC ATTATTTTTG AAAGTACAAA CTGCTGATAA AGATAATAAT
GAAGAATTTG AAGAAAAAGA AGAAGCTGCA GCATAA
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| Protein sequence | MHQLTQKRKT TVMIALMATM FFAAINQTII SAALPKVIAQ LGGMDYYSWV ITGYMLTSTI
STVIFGKLSD IYGRKIFLLS GIIIFLIGSF LTGLSANIFQ MIAFRGIQGI GGGILMSISL
TAVGDLYPPQ ERAKWTGVMM SIFGISSILG PVLGGVMVDY VAWKWLFWIF LPLGVIALIM
IWSLFPKLSG NSSESIDYLG SIFLALSITS LLLGFSWAGT KYAWALPQSL GLFAATLVGI
LVLILIERNA KSPVMPLSMF KNKGVTISFV ASFVMSGGMM GAMSYIPFFI QGVKGHSATT
SGLLNIPMSL MMIIFSTLVG RWMSKYGNYR LFAVLGLGIM SASMIIMANM NNIVWAAISL
IIFGVGLGFG MTVFTTTAQN SAPTSQLGVV TASCTLFRNL GGTIFIAIFG SIMNTSMARN
MEKVMSSGSG IDLTKLDVET AEKFKAMANP QLLLDNTKLE AIQASMPEQV QLLFSKVMDL
VRTVMGDALT SVFYIGALLL LVGVVLSLFL KVQTADKDNN EEFEEKEEAA A
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