Gene Ccel_0375 details

Gene Information

• Locus tag: Ccel_0375
• ID: 7309259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 428407
• End bp: 428976
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643607303
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_002504740
• Protein GI: 220927831
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATGTTT CGGATATAGC CATATTGAAA GAATACAAGA AGAATAGAAG ACGAGGTCTG 
GAGCTTGTAT ATGACAGATA TAAAAAATAT GTTTATACAA TAGCGTTCCA CTATGCAGGT 
AATAAGGAAG ATGCTCTGGA TATAACCCAG GAGGTTTTCA TATCTGTATT TAAATCAATG 
GAAGGCTTTA AGGAACAGTT TTCTATGCTG CCCTGGATTA AAAAAATTAC CGTAAATAAG 
TGCCTTAATT TCTTGAGAAG TAAAAAACCA AACTTGTCTC TTAATGAAAT CAATGAAAAC 
GGAGATGAAC TGCAAAGTAT TATAAGCTCA AATGAAAAAA CAGATGATGA AGTTTTATGC 
AAAGAAACAA GGCAAATACT TGAACAATCA ATCGGAAGTC TTCCTGAAAG GGAGAGGATG 
GTCGTACTGT TGAGACACAT AAAGCAAATG AAATATAGTG AAATTGCAAT TGTAATGAAG 
CTACCGCCAG GTACTGTAAA AACACTTATA CATAGAGCGA GAAAGACAAT TAAGGAAAAT 
ATGATTAGCT TGGGTATTTG GGAGGTATAA 

 

Protein sequence

MDVSDIAILK EYKKNRRRGL ELVYDRYKKY VYTIAFHYAG NKEDALDITQ EVFISVFKSM 
EGFKEQFSML PWIKKITVNK CLNFLRSKKP NLSLNEINEN GDELQSIISS NEKTDDEVLC 
KETRQILEQS IGSLPERERM VVLLRHIKQM KYSEIAIVMK LPPGTVKTLI HRARKTIKEN 
MISLGIWEV