| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0288 |
|---|
| Symbol | |
|---|
| ID | 7312081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 327909 |
|---|
| End bp | 330629 |
|---|
| Gene Length | 2721 bp |
|---|
| Protein Length | 906 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643607218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002504655 |
|---|
| Protein GI | 220927746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAA TTAAGCTGAA AAATGTTAAA GGGAAAAAAC TCATTTCAAG GGCAGCTGCA
GCAATACTTA GTATGACGCT GATCAGCCAG ACATTAGCTG TCGGTGCTGC AAATGAGAAG
ATTATAAATT CTTTTAATGC AGTTCCAACG GGACAGGCAA TTATAAATAA TCTTAAATAC
ACAGATATAG CTGGTCTTGA CAATAATTCT AAAAATTCAA TATTCCAAAA CGGGTCCTTG
GGAATTTACA TATCGCCCGG TAGCAAGAAA TTTAATCCAA AAGGGTATAT TACTAAAGAG
ATGGCTCTTT ATTTAATATA TACCGCTGCA AACAGAGTCA GTGAAGTAGA TGAACAGGGG
CAGGCACTTA ACACCGACCG TCCTGTAAAG AAAACAAATC CGCAGGATGT CCTGTTTGAT
GGAAGCTTGC AGTTGGCAGC AAATGATGGA CTTATATCCG AAACGGATTT AGCTGACGCG
ATGCAGGCAA ATCAGAAAAC ACTTGGTGCC TCAGACTTTA AGAGAAATTC CCCTGTACAA
AGACAGGAAT TTGCAACATG GATTGCAAAG GCACTGATGA TACCACCTGA ACCACAACAG
CAGGAGCTGC TGAATAACTT TTCTGATTGG AAAAGTTGTA AACCGGAAAA CGTACCTTAT
CTTGAGGCCG TACTCCGGGC AAAAGTCATG AACGGAAACG GCTCGGGCAA ATTCCTTCCT
CAAGGTATGG TTACAAGACA GCAAGCCGCA GCAATTCTTA AAAATGCAGA GAATATTATA
TTGCCTCTTA GAGACCTTGA ACAAAGAAAT GCAACTGTAG AAGGTATTCA GTCAGGAAGG
GACAGTTCCA ACGGAAGCAC GACTGACTAC AATACAATAA CAATAAGAAA CTCCGACGGA
CTTCTGGACG AAATTACCGT AACTAAAAGC AGCAGAAAGC CTGTATCCAA TACAAATGAA
TTAACAGGTT CTGCTACTGC TTCATACAGC TCGGAACTGC CCGTATTCAA AAATGGAAAG
ATAACAGGTT CGTCAGACTT AAAAGCAGGC GACCGTATAC AGTACATATC AGGCACTGAG
GACAAGATTG TCAGGTACGT ACGTGTTCTG GCAAAGAATG AAGTTGCTCC CGAAGAGGTA
GAAAAAGGAT TATATGCTGG AATAGTCGAG GAAAACAACC CACAGCTGGG TTATATTACT
TTATATAACG AGGATGGAAC AGGAAAAACT CCTCTAGCAC TTTCAAAGAT TAGAACGTAT
AACTACGCAG ATCCTAACGA TATAAAGGCA TATAAAAACC ATGTAGAAGC CCGACTTGAT
GATATCGAAG CGGGAGATAC TGTGTTCATA AGGGTTGATT CAAACAACTT GGTTACTTCT
GTAAGTGGTG TGGACAATTA CACTGTGAGA TACGGAAAAA TTATTTCCAA AAAGCTAAGT
TCTATAATTG TAGAAGCTGA TAAAAAGCAG CAGACCTATA ATATAGACCG TGCAAATGTA
ATCAAGGATG GGAAGCTTGT AAAATACAGT CAGCTTAAAG ACGGGGATAG TGTAAAGCTT
CTGATAAATG AAGCACCAAA TATGACAGTA TTAAAAGAAA TCACCGTAGA AGGTGGCGAT
AAGCTTGTAT CAAATGTATA TAAGGGAACC TTTGATTACT ACAATAGCAT ATCAAATACA
ATATTTATGA ATGATCCATG GACTCTTAGA AACGGACAGT GGGTGAAAGA AACCAACGGT
TCAAAGGTAA TTGAGCTTGG AAATGGTTTT ACTGCATATT TCGACGGACA AAAAAGAGCA
TTAAAGGACC TTACACTGTT AAAGGATAAC ACCGTATATA TTGCAAGTGA AAAGGACTAT
GGAAACGACG AGCTTGCGGT TGTAGCTTCA TTTACAGACA GTACGGACAA GGAAGTACCG
TATGATGACA AGGTTTATAT AACCGCAACA AATAGATTTG TACTTGAGAA GAATTTTGTA
AATATTACAT ATAATCCCGG AACAATTGTT ATTAAGGATG GACGCCTTGT TCAGGGAAGC
AGTGTTTCAA CTGACGATTA CGCTTATGTT ATGGCAAACA GAGACAACTC CGGCAGCAAC
AGTACTATAG TTGCAGGAGT GGTTTCAATA GAACAGAGGC CGGGAACAGA GGCCGTTCAG
CTGTACAGAG GAAGAATCAG CAGTATAGAC GAATACAAGA CGGTGACACT GGAATCCTAT
TCAAGGCTCA ACGGTACAAA CTGGGTTTAT GCAAATACTC CAATGACCTT TAACCTGTCC
TCCAACACGC GTATTACTGA TACGGATGGA ATCGTAGGTC AGGGCGACTT TACCGATGAA
AAAACGCAAG GTACCTTTAG TGGCAGGACT GTTTACATAT TGGGTGACGG TACTGATGCT
GTAGAAATAA GTACGGCACC ATTTGGTAAC TTTAATATTC AAGGTATAGT AAGCAATACT
GTAGGGGGAA CTGTAGCTGA AGATGGAACG GTTATACAGG AGCCACAGTC AATTATTTTA
AAAAACTGCA GGTACTACAA TACTTCGGCA CACCTGTGGG TAAGCAAGGG GGACAGTAAT
TTTAACATTC TCACAAATTC ACTGATCCTC AAAAACAACA AAAAGATTAA TCCTTCTGAC
CTGAAAAAAG GTGATTCAAT ACGGGTACTG AAAAAGGACA ATGCAGTTAT AGGGGATGCA
TATATAGTAA TAGTTGAATA A
|
|---|
| Protein sequence | MNLIKLKNVK GKKLISRAAA AILSMTLISQ TLAVGAANEK IINSFNAVPT GQAIINNLKY
TDIAGLDNNS KNSIFQNGSL GIYISPGSKK FNPKGYITKE MALYLIYTAA NRVSEVDEQG
QALNTDRPVK KTNPQDVLFD GSLQLAANDG LISETDLADA MQANQKTLGA SDFKRNSPVQ
RQEFATWIAK ALMIPPEPQQ QELLNNFSDW KSCKPENVPY LEAVLRAKVM NGNGSGKFLP
QGMVTRQQAA AILKNAENII LPLRDLEQRN ATVEGIQSGR DSSNGSTTDY NTITIRNSDG
LLDEITVTKS SRKPVSNTNE LTGSATASYS SELPVFKNGK ITGSSDLKAG DRIQYISGTE
DKIVRYVRVL AKNEVAPEEV EKGLYAGIVE ENNPQLGYIT LYNEDGTGKT PLALSKIRTY
NYADPNDIKA YKNHVEARLD DIEAGDTVFI RVDSNNLVTS VSGVDNYTVR YGKIISKKLS
SIIVEADKKQ QTYNIDRANV IKDGKLVKYS QLKDGDSVKL LINEAPNMTV LKEITVEGGD
KLVSNVYKGT FDYYNSISNT IFMNDPWTLR NGQWVKETNG SKVIELGNGF TAYFDGQKRA
LKDLTLLKDN TVYIASEKDY GNDELAVVAS FTDSTDKEVP YDDKVYITAT NRFVLEKNFV
NITYNPGTIV IKDGRLVQGS SVSTDDYAYV MANRDNSGSN STIVAGVVSI EQRPGTEAVQ
LYRGRISSID EYKTVTLESY SRLNGTNWVY ANTPMTFNLS SNTRITDTDG IVGQGDFTDE
KTQGTFSGRT VYILGDGTDA VEISTAPFGN FNIQGIVSNT VGGTVAEDGT VIQEPQSIIL
KNCRYYNTSA HLWVSKGDSN FNILTNSLIL KNNKKINPSD LKKGDSIRVL KKDNAVIGDA
YIVIVE
|
|---|
| |