Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0283 |
Symbol | ddl |
ID | 7309181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 321360 |
End bp | 322490 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607213 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_002504650 |
Protein GI | 220927741 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0108652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGA AACGTGTAGC TATTATTTTT GGCGGGCAGT CATCCGAGCA TGAAGTTTCA AGAGTATCGG CCCAGTCAGT AATAGAAAAT ATAGACAAGC AGAAATATGA TGTTGAAATT ATAGGAATTA CTAAAAGCGG ACAATGGCTA AAATATGACG GACCGGTTGA AAAAATAGGG AACGGTGACT GGGAAGCCAT TGCACAAAAA AAGCCAGTGG AAAGCCTATC TCAGGCAGGT ATATCTTCTT CCGGAATAAC TACGGTAAAT TCCGTGAGAC AGATAATGCC AGGGAATGTA AAAGCTCCCA TAGATGTTAT ATTCCCTGTA TTACATGGTT GCAATGGTGA GGATGGGACT ATTCAGGGAC TTTTTGAACT TGCAGGAATT CCCTATGTAG GGTGCGGTGT ACTTGGTTCA GCAGTTGGGA TGGATAAGGC CTATACAAAG ATAATATTTG AAAAGGAAGG CCTTCCCCAG GGAGACTATC TTGTATTTAA CAGGAAACAG GTATACAACC GGATAGAAGA TGTTGTTGCT CAGATAGAAG GCAGACTTAC ATATCCGTGT TTTGTAAAAC CATCCAATGC CGGTTCATCT GTTGGCGTAA ACAAGGCATC TGACAGGGAA AGCCTTGTAA AGGCTCTAAA CATAGCTGCA AAAAACGACA GAAGGATTCT TGTTGAGGAA TTTATTAATG GAAGGGAAAT CGAGTGTGCT GTTCTGGGGA ATGATAATCC GGTTGCATCA ACTGTGGGGG AAGTAGTTCC TTGTAATGAT TTCTATGATT ATGAGGCAAA ATACCAAGTA GGAGACAGCT CAAAAGTAGT TATTCCTGCC CCAAACCTGT CCAAAGAGAC CGTAGAAAAA ATTAGGGAGT ATGCTGTAAG AGCGTTCAAA TGCCTTGATT GTGCAGGATT GTCCAGAGTA GACTTCTTTG TTCATAAAGA AACAGGAGAA ATTTACATAA ATGAAATAAA CACTCTCCCG GGGTTTACAC AAATAAGTAT GTATCCTAAG TTGTGGGCTG CAAGCGGGAT CCCCTATTCA GAGCTGATTA ATAAACTTAT CGAACTGGCT TTTGAAAGGT ATGAGGACAC CAGAAGAGAG TATACAAACA CGCTGGACTA A
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Protein sequence | MSKKRVAIIF GGQSSEHEVS RVSAQSVIEN IDKQKYDVEI IGITKSGQWL KYDGPVEKIG NGDWEAIAQK KPVESLSQAG ISSSGITTVN SVRQIMPGNV KAPIDVIFPV LHGCNGEDGT IQGLFELAGI PYVGCGVLGS AVGMDKAYTK IIFEKEGLPQ GDYLVFNRKQ VYNRIEDVVA QIEGRLTYPC FVKPSNAGSS VGVNKASDRE SLVKALNIAA KNDRRILVEE FINGREIECA VLGNDNPVAS TVGEVVPCND FYDYEAKYQV GDSSKVVIPA PNLSKETVEK IREYAVRAFK CLDCAGLSRV DFFVHKETGE IYINEINTLP GFTQISMYPK LWAASGIPYS ELINKLIELA FERYEDTRRE YTNTLD
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