Gene Ccel_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0155 
Symbol 
ID7309064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp180862 
End bp182319 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content39% 
IMG OID643607084 
ProductOrn/Lys/Arg decarboxylase major region 
Protein accessionYP_002504523 
Protein GI220927614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACTA TAAAAGAATA TAACTTACCA ATATACAATT ATTTAAGGAA ATATGCAAAA 
GAAGATATAA ATGTATTCCA TATGCCGGGC CACAAGCTCT CGAGGGGCAT CCCCCGTGAA
CTTTCCGACG ATGTTCTCAA GCTCGACGTA ACAGAGATTG ATGGAACAGA TAACCTCCAT
TACCCCGAGG GAATAATAAA AGAGGCTCAG GAGCTTGCTG CAAGGGCCTT TGGAGCTGAC
CGTACTTTTT TTCTTGTAAA TGGCTCAACC TGTGGGATTC AGGCTGCTAT TATGAGTGTT
TGCACCAGGG GACAAAAAAT AATAATAGGA AGAGATTCGC ATAAATCCGT AGTATCGGGG
CTTATTTTGT CTGGGGCAAA ACCGATATTT GTATATCCGG AATACAATAG TAAGTTTGGA
ATACATGAGG GTATAACAGC ACAAAGTATT GAGAATGCCC TTAGTATGAA CCCTGATGCA
GCAGCCGTAC TGATAACCAG ACCCAATTAC TATGGAATAT GCAGTGACAT TAAAAATATA
GCAGATACAG TACATTCTTA CGGAAAACCA TTAATAGTAG ATGAGGCACA TGGAGCACAT
CTATCATTTA GTCCATTGCT GCCTCCTTCT GCAAACCAAT ACAACGCAGA TGTTGTTATA
CAAAGTGCTC ATAAAACACT ACCTGCTGTA ACACAAGGTG CATATTTGCA CCTTAATGGA
CCACTGATTG ACATTGATAA AATCCTATTT AATTTAGCCA TGCTCCAAAC TTCAAGTCCT
TCATATATTG TAATGACATA TCTGGATATT GCAAGAGAGC TTATGCAAAC GGAAGGTATA
CAAAGACTCA AGTATTTACT GGACGAAATT AATATTTTCA ACGGCAGGGT ATCTGAAATT
GGCGGTTATA AGGTTTTATC AGGTAAATAC TTGGGTATTA ATACAATACA GGATCCTACA
AGACTTGTTC TAAATGTAAG TAGACTTGGC ATAAGCGGAT TCCAGGCAGA AGCAACACTC
AGAGCAGAGC TGTCTACCCA GGTAGAAATG GCTGATTATG AAAACATTGT TTTAATTACA
ACAATAGCGG ATAAAAGGCG GTCTTTCGAG AGGCTATATG AAAGTTTGTC AAAGCTGGCT
CAAATACCTT TTGATAAAGA CTGCATACAA CAAATGGAAA AGAAGCGAGA ATTTGGAGAA
ATACAAAAAC CGTCAGATGG TTTCTCGGTA TTAAGCCCAT ATGAAGCCTA TGCTGCACAA
AAGGAGCAAA AGGAATTAAA ATCCTGCTTG GGAAGGATCT GTGCAGGAGT AATCACTCCG
TATCCTCCGG GTATTCCGAT TTTGTATCCG GGAGAAATTA TAGACGGTGA AAAGATAAGT
TACATAGAAT ATATTATTGA CTTGGGCGGA ACGGTTAATG GTGTTGGCAA TAATAATAGT
GTCCAAGTTG TGAAATAA
 
Protein sequence
MKTIKEYNLP IYNYLRKYAK EDINVFHMPG HKLSRGIPRE LSDDVLKLDV TEIDGTDNLH 
YPEGIIKEAQ ELAARAFGAD RTFFLVNGST CGIQAAIMSV CTRGQKIIIG RDSHKSVVSG
LILSGAKPIF VYPEYNSKFG IHEGITAQSI ENALSMNPDA AAVLITRPNY YGICSDIKNI
ADTVHSYGKP LIVDEAHGAH LSFSPLLPPS ANQYNADVVI QSAHKTLPAV TQGAYLHLNG
PLIDIDKILF NLAMLQTSSP SYIVMTYLDI ARELMQTEGI QRLKYLLDEI NIFNGRVSEI
GGYKVLSGKY LGINTIQDPT RLVLNVSRLG ISGFQAEATL RAELSTQVEM ADYENIVLIT
TIADKRRSFE RLYESLSKLA QIPFDKDCIQ QMEKKREFGE IQKPSDGFSV LSPYEAYAAQ
KEQKELKSCL GRICAGVITP YPPGIPILYP GEIIDGEKIS YIEYIIDLGG TVNGVGNNNS
VQVVK