Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0141 |
Symbol | |
ID | 7309052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 157776 |
End bp | 159869 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607070 |
Product | Glycosyl hydrolase 67 middle domain protein |
Protein accession | YP_002504509 |
Protein GI | 220927600 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3661] Alpha-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATAAAT CAAACGTAAA TGATGAGCTA TACGGTGCAA ATGGATATAA CTGTTGGCTT GGATATCATC TGCTTGAAAA CGGAGAGCTA AGAGAAAACT ATTCCCAATG GGCCTCCAAT ATAGTAATTT CTAAAGAACC GGACGAAATA AAAATAGCTT TAAGCGAACT TAAAAGCGGA ATAAATGGAA TATTGGGAGT TGATGCTGTT GTTGTAACCA GAGAGCCGGA ACAAAGCTCC TGCATTGCTC TGGGTGTGCT TGGAAGAGGA CAGAACATTG ATAGCTATGT AAAATACGAT GAGGTAGTGC AAATCGGTAA TGAAGGCTTT ATAATCAAGG CATTTAAAAC TGGTAATAGT GAAATCGTTG TTGTTGCCGG TACAACCACA AAAGGCCTAC TCTACGGAGT ATTCAGTCTG TTGAGACTAC TGCAAACTGA GGCAACGATT TCAGGTATCT TGAAGATTGA AAATCCTGCA AACCAGCTTC GTATTATAAA CCATTGGGAC AATATCGATG GAAGTATTGA AAGAGGTTAT GCGGGTAAAT CCATTTTCTT TACGGATAAT AAAGTAACCG AAGACCTTGG CAGAATAAAA GACTATGCAA GACTTTTATG CTCTGTTGGA ATAAACAGTA TTGTTATAAA CAATGTTAAT GTTCACAAGT ATGAGAGTAT GCTTATAACA GACAAATATC TCAATGATGT TGCAAGTCTG GCTCAAATAT TCCGTGACTA CGGTATAAAG CTGTATCTTA GTGCAAATTT TGCAAGTACT ATTGAAATAG GAGGACTAGC TACGGCCGAC CCGTTGGACC CGCAAGTAAG AAAGTGGTGG AAGGAGAAGG CCGATGAGAT ATACTCGTTG ATACCTGACT TTGGTGGTTT TCTGATTAAG GCAGATTCCG AATTCCGGCC TGGGCCTTTT ACTTATGGAC GTACCCATGC GGATGGTGCC AATATGCTTG CAGAAGCCTT GGAACCATAC GGCGGCCTGG TTATATGGAG ATGCTTTGTA TACAACTGTA TGCAGGATTG GCGTGATCGC ATCACAGATA GGGCTAGGGC TGCCTATGAC AACTTTATGC CTCTTGACGG CTTGTTCAGG GAAAATGTAT TGCTTCAGAT AAAAAACGGC CCTATGGACT TTCAGGTGCG TGAGCCGGTA TCTCCTTTAT TCGGGGGATT ACAAAAAACA AACCAGCTAT TGGAGCTTCA GATTACTCAG GAATACACAG GACAACAAAA GCACTTATGC TATCTGGTGC CAATGTGGAA GGAGATACTG GACTTTGATA CAATGGCAAA GGGTAGGAAC ACAAGTGTGA AAAAAATTAT CACAGGATCC GTGTTCAATA ACAAATTAGG CGGAATGGCA GCGGTAACAA ATATAGGAAA TGACCTGAAC TGGACGGGCC ACCAAATGGC TCAGTCAAAT ACATACGGTT ATGCACGTTT GTGTTGGAAT CCTGATTTAT CAGCTGAAAA GATTACTGAT GAATGGGTTA GAATGACTTA CTCAAATTAT GAAAAGGTTG TGAATACCGT AAAGGAAATG CTGCTGGGTT CATGGAGAAC CTATGAGAAT TATACTTCTC CTCTGGGAAT AGGTTGGATG GTTAATCCCA ATCACCATTA CGGGCCGAAT GTAGACGGAT ATGAATATGA TAAGTGGGGA ACATATCACA GGGCAGACCA TAAGGGGATC GGAGTAGACA GAACAGTCAA GAGCGGAACA GGATATGCGG GACAATATCA CAAGGATGTT GCCGGGATTT ATGAGGACAT GGACAAGTGT CCTGAGGAGC TTTTGCTATT TTTCCACCAT ATGCCCTACG ACTACATACT AAAATCAGGC GAAACGCTGA TTCAATACAT TTACAACACC CATTTCAAAG GGGTTGAGGA GGTAGAAGAA TTGAGGAACA AGTGGTTTAG TCTGAAAGGT TGGATTAGCG AGGAAATATT TCTGCACGTT CTGGAAAGAT TGGACGGACA GTTGGAACAT TCCAAAGAGT GGAGAGATGT TATAAATACA TATTTCTATC GAAAAACAGG TATATCTGAT GAACTTGGCA GAAAAATATA TTAA
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Protein sequence | MYKSNVNDEL YGANGYNCWL GYHLLENGEL RENYSQWASN IVISKEPDEI KIALSELKSG INGILGVDAV VVTREPEQSS CIALGVLGRG QNIDSYVKYD EVVQIGNEGF IIKAFKTGNS EIVVVAGTTT KGLLYGVFSL LRLLQTEATI SGILKIENPA NQLRIINHWD NIDGSIERGY AGKSIFFTDN KVTEDLGRIK DYARLLCSVG INSIVINNVN VHKYESMLIT DKYLNDVASL AQIFRDYGIK LYLSANFAST IEIGGLATAD PLDPQVRKWW KEKADEIYSL IPDFGGFLIK ADSEFRPGPF TYGRTHADGA NMLAEALEPY GGLVIWRCFV YNCMQDWRDR ITDRARAAYD NFMPLDGLFR ENVLLQIKNG PMDFQVREPV SPLFGGLQKT NQLLELQITQ EYTGQQKHLC YLVPMWKEIL DFDTMAKGRN TSVKKIITGS VFNNKLGGMA AVTNIGNDLN WTGHQMAQSN TYGYARLCWN PDLSAEKITD EWVRMTYSNY EKVVNTVKEM LLGSWRTYEN YTSPLGIGWM VNPNHHYGPN VDGYEYDKWG TYHRADHKGI GVDRTVKSGT GYAGQYHKDV AGIYEDMDKC PEELLLFFHH MPYDYILKSG ETLIQYIYNT HFKGVEEVEE LRNKWFSLKG WISEEIFLHV LERLDGQLEH SKEWRDVINT YFYRKTGISD ELGRKIY
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