Gene Ccel_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0140 
Symbol 
ID7309051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp156692 
End bp157774 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content40% 
IMG OID643607069 
Productmannonate dehydratase 
Protein accessionYP_002504508 
Protein GI220927599 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA CCTTTCGATG GTTCGGTGAA AAGGATGATA GTATCAGTTT AGAGCAAATA 
AGACAAATAC CCGGCGTTAC AGGAGTTGTC GGAGCTTTGT ATGATGTACC TGTTGGCGAC
GTTTGGCCAA TGGATAAAAT TATTGCACTA AAGGATTCTG TTGAAAAGGC TGGCTTAAAG
CTTGAGGTTA TTGAGAGTGT AAATGTACAT GAAGATATCA AACTGGGGCT TTCAAGCAGG
GATAAATACA TTGAAAATTA CAGACAATCT ATAATTAACT TGGGGAAAGC AGGGGTAAAG
GTTATATGCT ATAACTTCAT GCCTGTATTT GACTGGCTGA GAAATAATCT TGCATATCCA
TTGCTGGATG GCTCCAACGC ACTTTGCTAT GACCACGATA TAGTAAAGGA TATAGACCCG
GTTAAACTGG TAGAGGATAC TGCCAAAAGC TCTAACGGGT TTACACTGCC GGGCTGGGAA
CCTGAAAGAT TAAGCGAATT AAAAGATACA TTTGAAAAAT ACAAGAACGT GAATGAAGAT
AAATTATTTG ACAACCTGGA ATATTTTCTG GAAAATATTA TTTCTGCATG TGAGGAAGCC
GACGTAAAAA TGGCTATACA TCCAGATGAT CCACCGTGGC CTCTTTTTGG TCTGCCAAGG
ATTGTTACCG ATAGGAAAAA TCTTGAAAGA CTTGTTAATC TAGTTGACAG TCCATATAAT
GGGTTGACCC TTTGCAGTGG CTCTTTGGGA GCAAACCCAG ATAACAATAT ACCTGATTTG
ATAAGGAATT TTGGCAAAAT GGGGAGAATT CATTTCGGTC ATGTAAGAAA CCTTAAGTTC
TTTGGAGAAA GAAAATTCCA TGAATCTTCT CACCTTTCAT TAGACGGTTC CTTCGATATG
TTTGAAATTA TGAAGGCATA CCACGATATA GGGTTTAAAG GGTATATACG GCCTGATCAC
GGCAGAATGA TATGGGCTGA AAAGGCAAGG CCGGGATATG GCCTCTATGA CAGGGCATTA
GGCGTTACTT ATCTTAACGG ATTATGGGAA GCGATAGGGA AAATGACCAG CGGGGGGGAA
TAA
 
Protein sequence
MNMTFRWFGE KDDSISLEQI RQIPGVTGVV GALYDVPVGD VWPMDKIIAL KDSVEKAGLK 
LEVIESVNVH EDIKLGLSSR DKYIENYRQS IINLGKAGVK VICYNFMPVF DWLRNNLAYP
LLDGSNALCY DHDIVKDIDP VKLVEDTAKS SNGFTLPGWE PERLSELKDT FEKYKNVNED
KLFDNLEYFL ENIISACEEA DVKMAIHPDD PPWPLFGLPR IVTDRKNLER LVNLVDSPYN
GLTLCSGSLG ANPDNNIPDL IRNFGKMGRI HFGHVRNLKF FGERKFHESS HLSLDGSFDM
FEIMKAYHDI GFKGYIRPDH GRMIWAEKAR PGYGLYDRAL GVTYLNGLWE AIGKMTSGGE