| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0132 |
|---|
| Symbol | |
|---|
| ID | 7309043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 146462 |
|---|
| End bp | 149143 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643607061 |
|---|
| Product | cyanophycin synthetase |
|---|
| Protein accession | YP_002504500 |
|---|
| Protein GI | 220927591 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.914556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGATTC AAAGCATTTA TTGCTTTAAA GGAAGGAATA TATACAGTCA TCAACCGGTA
ATCCGTATGG TAGTAGATAT AGGAAAATAC GAAGAAGGAC CTACAAAGGA TATACCGGGG
TTTAATAAAA AACTTCTCGA ATTCTTTCCT GAAATAGCAG AACATACCTG CGGAGTAGGA
TATGCAGGAG GATTTGGGGA AAGATTAATT GAAGGAACAT ACATGGGGCA TGTAGCAGAA
CACTTGATAA TAGCAATTCA GAACAGGTTT GGTTATGGCG TAAAATATGG AAAGACGAGA
CAGATAGAAA ATACATCCAA ATACTATATC ATTTATGAAT ACTGCAATGA GGCTTTTGCA
ACCGAATGTG GAAGAAAAGC AATCGAGATA GTCCATTCTT TTGCCGAAGG AACTCCAATA
GACATAGAAA AAATAATGAG GGAACTTAAA AGGGTATTAC TAGATACAGA AATGGGCCCT
AGTACAAAGG CCATTTATCT GGCAGCAAAA AGAAGGGGAA TTCCGGTAAC GAGAGTCGGA
GATGGAAGTA TTCTAAGATT AGGTTACGGT AAATATACAA GGATAATTCA GGCTTCGCTT
ACGGATGGGT CAAGCTGCAT AGCAGTGGAT ATTGCGTCAG ACAAGCAGAT GACAAAAAAA
CTTTTAATGG ATAACAACGT ACCGGTTCCA TGCGGTATTG TTGTAAGAAC CGAACAGGAG
GCCTTTGAGG CGGTCGAAAT GGTAGGGTAT CCTCTTGTTA TAAAGCCTAT CGATTCCAAT
CAGGGAAAAG GAGTGACTGT AAATATCAGT ACTGAGGATA AAATCCGTGC AGCATATTCA
GAAGCAAGAA AATATTCCAG AAAGGTTATA GTTGAGAAAT ATGTATGCGG CAAGGATTAC
CGGGTACTTG TTGTCGGGGA CAAAGTTTGT GCTGTTGCGG AACGTCGGCC TCCTAGGGTA
ACGGGAGATG GAATCAGTAC CATAGCACAG CTTGTGGAAT ATGAAAATAC CAACCCTTTA
AGGGGTGAAG ATCATGAAAA GCCGTTGACA TATATTAAAC TGGACGATAT ATCCATAAAT
TATCTCAAGC TCCAGGGATA TTCACCGAAT TCTATTTTGA AAGCTGGTCA GTACGTGAAC
CTCAGGCAGA ATGGAAATTT GAGTACCGGG GGAACAGCAA GAAACTGTAC GAGGGATATA
CACCCCAAAA ACGCTGAGTA TGCAATTATT GCTGCAAAAG CCATGGGACT TGATATAGCA
GGAGTAGATT TTTCAGCACA AGATATTTCA ATTCCTATTG ATAACAATCG AGGTGCTATA
ATTGAGGTTA ATGCCGCACC GGGACTGAGA ATGCATCTTC ATCCCAGTGA GGGTGAGCCG
GTAAATGTTG CGGATTCCAT ACTTGATATG ATGTATCCGG CAAATAAACC GTTCAGCATA
CCAGTCGTGG CGGTTACAGG AACAAATGGC AAGACAACTA CAACAAGACT GATAAGACAC
ACACTATCTC TTTTAGGATA TAACGTTGGG ATGACATCAA CCAGCGGTAT TTACGTAGGC
AATGAATGTG TTCAGAAGGG CGACAACACC GGACCTGTAA GTGCGGAAGT AATACTGGCT
AACAAGGAAG TAGACGTTGC AGTTCTGGAA ACAGCCAGAG GAGGAATAGT TCGTAGAGGT
TTAGGGTATG ACCTAGCAGA CGTAGGTGTA CTTATTAATA TCAGTGAGGA CCATCTTGGG
ATAGACGGTA TAAATACACT TGAGGATCTT GCAAAAACCA AGGCACTTAT AGTGGAAGCA
GTAAAGCACG ATGGATATGC AGTATTAAAT GCTGATGATG GTATGACTCC ATATGTACTG
GAAAGGACTC GCAGCAATGT CATAATGTTC AGCAGAGGTA TATCAAACCC CGTATTTAAA
AGGCATTGTA AAAATTCAAA AAACATAGCT GTATACGTAC GGGACGGATA TATATGGATA
CAAAGAAATG GCAAAAAGCT TCCGCTTATA AGCTTGGATG ACATACCTAT AACTTTCGGA
GGAATAGTTG ACTGTAATAT AGAAAACTCA CTTGCAGCCA TATCAGCACT CATAGGACTC
AACATTCCAT TGGACATAAT AATAAAGGGT ATGAGTACGT TCCAGCCTGA TACACAATTA
AATCCCGGTA GATTCAATAT TTTTGACATG GGGACTTTCA AAGTAATGAT AGATTACAGT
CACAATATAG CGGGATATTC TGCTGTAGTA AAATTTATGC AAAAGGTAAA AGCAAAAAGG
CTTGTAGGGA TAATAGGGAT GCCGGGGGAC AGACAGGATT CAAACTTTAA GGAGGTTGGA
GAACTTTGTG CAAAATCCTT CCACAGGATT TATATAAAGG AAGACATAGA TTTACGTGGA
CGAAGACGAG GAGAAGTGGC AAATATTTTT GAACAGAGCA TGATTAATGC CGGAGCAAAA
AGGGAAAATA TCGAGATAAT ATACAGTGAA ACAGAAGCAC TTGAAAAAGC CATGCTTGAC
GCTCAGCCGG GGGATTTGAT AGCAATGTTC TATGAAGAAT TTGACCCGGC CATTCAGGTG
ATAAACAGAT TTAAAAAAGA GCAGGAACAT GCAAATGAAA TACTTGAGGG CAGTTTTAAT
ACAACTATTG AAAAATTAGG GCAATTCAGT ACAAATGCAT AG
|
|---|
| Protein sequence | MQIQSIYCFK GRNIYSHQPV IRMVVDIGKY EEGPTKDIPG FNKKLLEFFP EIAEHTCGVG
YAGGFGERLI EGTYMGHVAE HLIIAIQNRF GYGVKYGKTR QIENTSKYYI IYEYCNEAFA
TECGRKAIEI VHSFAEGTPI DIEKIMRELK RVLLDTEMGP STKAIYLAAK RRGIPVTRVG
DGSILRLGYG KYTRIIQASL TDGSSCIAVD IASDKQMTKK LLMDNNVPVP CGIVVRTEQE
AFEAVEMVGY PLVIKPIDSN QGKGVTVNIS TEDKIRAAYS EARKYSRKVI VEKYVCGKDY
RVLVVGDKVC AVAERRPPRV TGDGISTIAQ LVEYENTNPL RGEDHEKPLT YIKLDDISIN
YLKLQGYSPN SILKAGQYVN LRQNGNLSTG GTARNCTRDI HPKNAEYAII AAKAMGLDIA
GVDFSAQDIS IPIDNNRGAI IEVNAAPGLR MHLHPSEGEP VNVADSILDM MYPANKPFSI
PVVAVTGTNG KTTTTRLIRH TLSLLGYNVG MTSTSGIYVG NECVQKGDNT GPVSAEVILA
NKEVDVAVLE TARGGIVRRG LGYDLADVGV LINISEDHLG IDGINTLEDL AKTKALIVEA
VKHDGYAVLN ADDGMTPYVL ERTRSNVIMF SRGISNPVFK RHCKNSKNIA VYVRDGYIWI
QRNGKKLPLI SLDDIPITFG GIVDCNIENS LAAISALIGL NIPLDIIIKG MSTFQPDTQL
NPGRFNIFDM GTFKVMIDYS HNIAGYSAVV KFMQKVKAKR LVGIIGMPGD RQDSNFKEVG
ELCAKSFHRI YIKEDIDLRG RRRGEVANIF EQSMINAGAK RENIEIIYSE TEALEKAMLD
AQPGDLIAMF YEEFDPAIQV INRFKKEQEH ANEILEGSFN TTIEKLGQFS TNA
|
|---|
| |