Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0126 |
Symbol | |
ID | 7309038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 140802 |
End bp | 142061 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643607055 |
Product | 3-isopropylmalate dehydratase large subunit |
Protein accession | YP_002504494 |
Protein GI | 220927585 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein [TIGR02083] 3-isopropylmalate dehydratase, large subunit [TIGR02086] 3-isopropylmalate dehydratase, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAATGA CAATGACACA AAAGATTCTT GCAAGCCATG CGGGAGTAGA TAAATTAGTA CCCGGACAAT TGATAATGGC TAAACTTGAT ATGGTTCTGG GGAATGATAT AACATCTCCC GTAGCTATCA AGGAGTTTGA TAAAATCGGT CTGGACAAAG TATTTGATAA GAACAAAATT GCCATAGTAC CGGACCATTT TACTCCCAAC AAGGATATTA AGTCTGCAGA ACAGGTAAAG GTTTGCAGGG AGTTTTCAAA GAGAATGGGA ATAGTAAATT TCTTTGAGGT AGGGCAAATG GGGGTTGAAC ACGCACTGCT GCCCGAAAAA GGACTTGTAG TACCGGGTGA TGTTGTTATA GGAGCGGATT CACACACCTG TACCTATGGA GCACTTGGTG CATTTTCAAC AGGAATTGGC AGTACTGACA TGGCAGCGGG GATGGCAACA GGAAAAGCTT GGTTCAAGGT ACCGGAAGCG ATTAAATTCG TGCTTAGAGG TAAGCCGCAA AAATGGGTGG GCGGAAAAGA TATAATTCTT CACATTATCG GGATGATAGG CGTTGACGGT GCACTCTACA AATCAATGGA GTTTACAGGT GATGGTGTAA ATGCTCTTTC AATGGACGAC AGGTTCTCAA TGGCAAATAT GGCTATAGAG GCTGGTGCAA AAAACGGTAT TTTTGAAGTG GACGAAAAAA CCGTTGAATA CGTAAAGGAA CATTCCATCA GGCATTATAC CGTATACAAG GCAGATGAAG ATGCTGAATA TTCGGAAGTT TATGAAATAG ACCTTGCGGA AGTAAAACCA ACAGTTGCAT TCCCTCACCT TCCTGAAAAT GCACGTACTA TTGACAATGT TGGTGATATT AAAATTGACC AGGTTGTAAT CGGTTCGTGT ACAAACGGAC GTATAGAAGA CATGAGAATA GCAGCAGGAG TATTGAAGGG AAGAAAGGTT AGCGACAACG TAAGATGCAT TATCATTCCT GCAACTCAAA AAATATGGAA ACAGGCTATG AATGAAGGCT TGTTTGACAT ATTCATCGAT GCCGGGGCTG CTGTAAGCAC ACCTACCTGC GGCCCATGCT TGGGCGGTCA TATGGGTATT CTGGCAAAGG GGGAAAGAGC AGTTGCAACT ACTAACAGAA ATTTTGTAGG ACGTATGGGA CATCCCGAAA GCGAGGTTTA TCTTGCGGGT CCTGCGGTTG CAGCGGCTTC TGCGGTAGCA GGCAGGATTG CCGGGCCGGA TGAGATATAA
|
Protein sequence | MGMTMTQKIL ASHAGVDKLV PGQLIMAKLD MVLGNDITSP VAIKEFDKIG LDKVFDKNKI AIVPDHFTPN KDIKSAEQVK VCREFSKRMG IVNFFEVGQM GVEHALLPEK GLVVPGDVVI GADSHTCTYG ALGAFSTGIG STDMAAGMAT GKAWFKVPEA IKFVLRGKPQ KWVGGKDIIL HIIGMIGVDG ALYKSMEFTG DGVNALSMDD RFSMANMAIE AGAKNGIFEV DEKTVEYVKE HSIRHYTVYK ADEDAEYSEV YEIDLAEVKP TVAFPHLPEN ARTIDNVGDI KIDQVVIGSC TNGRIEDMRI AAGVLKGRKV SDNVRCIIIP ATQKIWKQAM NEGLFDIFID AGAAVSTPTC GPCLGGHMGI LAKGERAVAT TNRNFVGRMG HPESEVYLAG PAVAAASAVA GRIAGPDEI
|
| |