Gene Ccel_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0123 
Symbol 
ID7309036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp136430 
End bp138361 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content39% 
IMG OID643607052 
ProductABC transporter related 
Protein accessionYP_002504491 
Protein GI220927582 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATATTT TATCCGCTGA AGGTATTTCA AAAAGCTATA GTGAAAAAAT ATTATTTAAT 
GATATATCAT TGGGTATTGG CGAGGGTGAC AAAATAGGTC TTATCGGTGT AAATGGAACG
GGCAAAAGTA CTCTTTTGAA GATAATTGCA GGTATGGAGT CAGTGGACAC TGGAAGAATA
TTAAAATCAA ATAAAGTGCG TGTAGGCTAT CTTGAACAAA GTCCTGCTTT CAAGCCGGGA
ACAACCGTAC TACAGCAGGT ATTTAGAGGA CATTCATCAG AAATGCTACT GCTCAGGGAA
TATGAAGAAA TACTTTTAAA AAGCAGTCAG AATCCATCAG ATGAAAAGCT TGAAAAAAAG
CTTCTGGATT TAATGCACCA AATGGACACT ATGAACGCTT GGACATTGGA AAGTGAAGCA
AAAACCATAC TTACTAGATT GGGAATTGAC AGCTTTGACG CGGATGTGGC AGATTTGTCG
GGTGGGCAGA GGAAGCGTAT TGCAATGGCA GGAGCATTGA TTAATCCCAC CGAGCTGCTT
ATATTGGACG AGCCTACCAA CCATATTGAC AATGAAACGG TAGACTGGCT TGAAAAGTAT
CTGAATAACA AAAAAGGTGC TCTCTTGATG GTTACTCATG ACAGGTATTT TCTGGATAGG
GTTGCAAACA GAATAATAGA GCTTGACAAT GGAAAGCTTT ATAGCTATCA GGCCAATTAC
ACCAGGTTTC TTGAGCTGAA GGCCCAACGT GAAGAGCTGG AACAAGCTTC TGAAAGAAAG
AGGCAGAACC TTTACAGGAA CGAACTTGAA TGGATCAGAA GGGGTGCACT GGCAAGATCC
ACAAAACAAA AGGCAAGGAT AGAAAGGTTT GAGAAGCTTA AGGAGGCAGA TGGGCCTAAG
CAGGATGAAA ATATTGAAAT TCAGGTGGGG TCTGCGAGAC TTGGAAGAAA GATAATTGAA
GTAGAAAATG TAAAAAAATC TTATGGTGAT AAGACGTTAA TTAGCGATTT CAGTTATGTA
CTGCTAAGAG ATGACAGAAT AGGAATCATA GGGCCTAATG GAATTGGGAA ATCAACACTT
CTGAAATTAC TTTCAGGGAA GATTAAACCT GATTCGGGTA AAGTTGAAAT TGGTGAAACA
GTAAAAACTG GATTTTTTAC CCAGGAAAAC ACAGATATGG ATCAAAACCT TAGGGTTATT
GATTACATCA GATCGGTGGC TGAGCATATA GAAACCGCAA ACGGAAGCGT TAGTGCTTCC
CAGATGCTAG AGAGGTTTCT TTTTCCGCCA AGTGTACAGT GGACTCCTAT TTCAAAGCTT
TCAGGTGGAG AGAAAAGAAG GCTTTATCTT TTAAGCATAC TTATGGATGC TCCTAATATA
TTGTTATTGG ATGAGCCTAC AAATGATCTG GATATTCAGA CTCTTACCAT TCTCGAAGCC
TACTTGGATG AATTCCCGGG AGCGGTTATA ACTGTTTCTC ATGACAGATA TTTCCTGGAT
AGGACAGTAA ACAGGATATT TTCATTTGAA GGGTACGGAA GGATTACCAA GTATGCAGGA
AACTACTCGG ATTACAGAGG ATATATGGCT GGACGGGAAA AACAGGATGA TACAGGAAAG
GCTGCTGACC CGGATAAAAA GAATAACAGT TCACAAAATA AGACGGAGTG GCAAAAGAAC
AAGGAAAAAC CTCTAAAATT CACTTTTAAG GAACAAAAGG AATTTGATGA AATAGACGAT
GTGATAGAGG CTTTGGAGAC CGATATAGAA AAGGTAAAAA AGGATATAGA CCAATCTGTA
ACGGATTTTG CAAAGCTTCA GGAGCTTCTT GAAAAGCAGC AGAAACTTGA AAAGGAACTG
GATTTCAAAC TCGAAAGGTG GACTTACCTT AATGAGCTGG CTGAAAAGAT AGAGAACAGT
AAGAAAAAAT AA
 
Protein sequence
MNILSAEGIS KSYSEKILFN DISLGIGEGD KIGLIGVNGT GKSTLLKIIA GMESVDTGRI 
LKSNKVRVGY LEQSPAFKPG TTVLQQVFRG HSSEMLLLRE YEEILLKSSQ NPSDEKLEKK
LLDLMHQMDT MNAWTLESEA KTILTRLGID SFDADVADLS GGQRKRIAMA GALINPTELL
ILDEPTNHID NETVDWLEKY LNNKKGALLM VTHDRYFLDR VANRIIELDN GKLYSYQANY
TRFLELKAQR EELEQASERK RQNLYRNELE WIRRGALARS TKQKARIERF EKLKEADGPK
QDENIEIQVG SARLGRKIIE VENVKKSYGD KTLISDFSYV LLRDDRIGII GPNGIGKSTL
LKLLSGKIKP DSGKVEIGET VKTGFFTQEN TDMDQNLRVI DYIRSVAEHI ETANGSVSAS
QMLERFLFPP SVQWTPISKL SGGEKRRLYL LSILMDAPNI LLLDEPTNDL DIQTLTILEA
YLDEFPGAVI TVSHDRYFLD RTVNRIFSFE GYGRITKYAG NYSDYRGYMA GREKQDDTGK
AADPDKKNNS SQNKTEWQKN KEKPLKFTFK EQKEFDEIDD VIEALETDIE KVKKDIDQSV
TDFAKLQELL EKQQKLEKEL DFKLERWTYL NELAEKIENS KKK