Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0042 |
Symbol | |
ID | 7308961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 44466 |
End bp | 45452 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643606970 |
Product | primosome, DnaD subunit |
Protein accession | YP_002504410 |
Protein GI | 220927501 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3935] Putative primosome component and related proteins |
TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTTG AGGATTTCAA GTCACTACTT TACTCTGACA CATTGGTGTC AGATATTTTT ATTAGCCAGT ATATGCCTTC CATGGATAGC ACATGTGTAA AGGTTTATAT TTACATGTTG TTCTTATGCA AACACAATAA GAAGGTAACC TCTGACGAAC TTGCAAAAAC TCTTAATCTG TCTCTGGATG AGGTTAAGTC TGCCTTGACC AATCTTGATA ACTTGGAAGT TATCACCTGG GTAGAAGACA AAATACAGCT TAACGACCTA AAAGAAGCTG AAATAAACAG AATGTATAAG CTAAAGGCAA TCTCTACACC AGAGCAGGCT AATGAGAACT TTGAGAAGAA TAAAAGTAGA AACAACACAC TGGCTGCAAT TAATTCAAAG TTCTTTCAGG GGCTTATGGC CCCAAATTGG TATCTTACTA TAGATAACTG GTTTACGATA TACAAGTTTG ATGAGGACGT AATGTACACC CTTTTCAAGT ACTGCCATGA CAACAATACC TTCCACAAGA GCTATATAGA GGCAGTTGCA ACAAACTGGC ACAGGAGGGG CATTCAGAAC TTTTTTGATC TTGAAAAATA CTTTGAAGAT ATGGCACAGG TACGTGGCAT TAAAGGAACT ATTATCAAAA AGCTTCGTCT GAGAAGGGCA CTGACAGAAT ACGAGAGTGA ATATGTTGAA AGATGGGTTA TTGATTACAA GTATGGGTTT GATGTTATTG AACTGGCTTT GAAAAAAACC GTAGGAAAAA CCAATCCTGA CTTTAAATTT CTCAATAGTG TATTAACCCG TTGGCATGAT CTTGGACTTG TAACTGCCGA AGATATACAT GGTTATGAAA ATAGTATCAA GTCCCAGCCG CGGTCAGGTC AGAGTACGCA GAGGGCCAAG ACTAAGCCAT CTCAAAGGGA TAATTTTGAG CAAAGGGATT ATGGTGATGA ATATTTTGAA AACTTTTTTA CAAACACCTC GAAATAG
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Protein sequence | MYFEDFKSLL YSDTLVSDIF ISQYMPSMDS TCVKVYIYML FLCKHNKKVT SDELAKTLNL SLDEVKSALT NLDNLEVITW VEDKIQLNDL KEAEINRMYK LKAISTPEQA NENFEKNKSR NNTLAAINSK FFQGLMAPNW YLTIDNWFTI YKFDEDVMYT LFKYCHDNNT FHKSYIEAVA TNWHRRGIQN FFDLEKYFED MAQVRGIKGT IIKKLRLRRA LTEYESEYVE RWVIDYKYGF DVIELALKKT VGKTNPDFKF LNSVLTRWHD LGLVTAEDIH GYENSIKSQP RSGQSTQRAK TKPSQRDNFE QRDYGDEYFE NFFTNTSK
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