| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0040 |
|---|
| Symbol | |
|---|
| ID | 7308959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 42369 |
|---|
| End bp | 43385 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643606968 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_002504408 |
|---|
| Protein GI | 220927499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAATA ACATTGATAG ACAGCTTTCT TCAATCAGGA CTGATGAGAA TAAAAAAAGA
TTGCCGGGTC CTGTTGCCTC AGGACTGCTT TTTTCCATAG TAACTATTTT ACTGACCTTC
GGTGGCCCTA TTCTAAAAAT AAATAACAGA TATCTTAAAA GCGGAATGGG AGAACTGCTT
TTTATCCTGC TGCCTGTAGT AGCCTTTTTA ATTATTGGAA GATATGACAT AAAAAGGACA
TTGAATCTTA GAAGAACAAG GCCTCTTAAT TATTTGCTTG TTGTTCTCGT AACGCTGTTT
GGAATGCCTG TGGTAGGTGT TCTTAATGCA ATAACTTTTG TAGTAATAAG GGCAATCTTC
GGAAGAAACC TTCCTACACC TCGGATAATT GTAAATGATG TACCTACCCT TTTAATAGCT
TTACTGGTTA TAGGAGTTTC GGCAGCAGTA TGTGAGGAAA TTATGTTCCG TGGTCTTATA
CAAAAAGGTT ACCGTAAATA TGGAATCGCC CTTTCTCTGG GTATAACATC TGTATTGTTC
GGCCTTCTGC ACCGTGATAT TCAAAAGGCT GTAAGTACGA TTCTTCTTGG TGCATTAATA
GGGTTTATTG TATATAGAAC AGGAAGCATT TTTACAGGAA TGGTTGCCCA TTTTACCAAT
AATGCTTCGG CCGTAATTTT ATCTTTCATG GCCTCAAAAA TGTCGGGTTA CTTAAATGGA
GAGAGTATAC AGCAAACACA AAGTTTTGAT TTTTCGAATT TGCCTGTAGC TTCTATAGGA
ATTGTTTTCT TATTCTATGC TATAATTTAT ATGGGCTTAG TTTCAGGTTT TGTAGCTTTA
CTGTATGCAT TCTATAGAAG TACAAAGAAG GATGTTAAGG CAATGGAGGA AGAAGCGGTC
CAATATGAAT TTACCAATGA AAAAATCAGT TTACCAGCAG TTTTGAGTAT GCTGCCGGGA
CTTTTGATTA TTTTATTTAC ATTTTTGTAC CAGATAATGA AATTGAAATG GGGTTAA
|
|---|
| Protein sequence | MENNIDRQLS SIRTDENKKR LPGPVASGLL FSIVTILLTF GGPILKINNR YLKSGMGELL
FILLPVVAFL IIGRYDIKRT LNLRRTRPLN YLLVVLVTLF GMPVVGVLNA ITFVVIRAIF
GRNLPTPRII VNDVPTLLIA LLVIGVSAAV CEEIMFRGLI QKGYRKYGIA LSLGITSVLF
GLLHRDIQKA VSTILLGALI GFIVYRTGSI FTGMVAHFTN NASAVILSFM ASKMSGYLNG
ESIQQTQSFD FSNLPVASIG IVFLFYAIIY MGLVSGFVAL LYAFYRSTKK DVKAMEEEAV
QYEFTNEKIS LPAVLSMLPG LLIILFTFLY QIMKLKWG
|
|---|
| |