| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0002 |
|---|
| Symbol | |
|---|
| ID | 7308925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1598 |
|---|
| End bp | 2698 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643606928 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_002504370 |
|---|
| Protein GI | 220927461 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.039801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA TTTGTTCTAA AGAAAATTTA CTTAACGGGA TCAATATAGT TCAAAAAGCC
GTTTCAACCA AAACAACTTT GCCAATACTT GAAGGAATTT TACTTAATGC AGATGATAAA
TTCAAATTAA CAGGTAATGA CCTTGAAATT GGTATAGAAT GTTATGTTGA AGCAGATATA
AGGAGTACCG GCTGTATTGT TATAAATTCT AAAATATTTG GAGATATTGT AAGAAGACTG
CCTGATTCAG AAGTCCTTAT CGAAGTTACG GGTAATAACC TTGTAATTGT TGAATGTGAA
AATTCACATT TTGAGATAAA AGGAATTAAT CCATCAGGCT ATCCATCACT ACCTGTTGTG
GAAAAGGAAA ATATTTTAGA ATTAACACAG AGTGACTTAA AGGATATGAT CAGACAAACT
GTTTTTGCAG TAGGTTCTGA TGAAAATAGA CCTGTATTGA CTGGATCTCT TATTGAGGTG
AAAGACAAAG AATTGGTTAT TGTATCAATA GACGGATTTA GACTTGCACT TAGAAGAAAA
AATTTAGAAA ATGATATTAA TGATTTTAGT GTTATTGTAC CGGGAAAAAC ATTGAATGAA
ATATCAAAAA TCCTTCAACC AACTGATGAA GAGGTTTCTG TTTATAGTTC AAACAATCAG
GTTGTTTTTG ATGCTAAATC ATGGAGGATT GTTTCAAGAC TCATAGAAGG GAAATTTTTA
AATTATAATA GTTTATTAAA TAAAGATTTT GAAACAAAAG TTATTATTAA TATAAAAGAG
TTTCAATCAA GCCTTGAAAG AGCTTCGCTT ATATCTATGA ATGATAAAAA TAGTCCTGTA
AAGCTGTTTA TAGGTAATGA TAAAATAATA ATTACGTCTA ATGCGGATCT TGGAAATGTA
CGTGAAGAGG TTAAAGCTGA AATAGAGGGG AATGCTCTGG AAATAGGCTA TAATCCTGCT
TTTTTAATTG ATGCTTTAAA GGCAATAGAC GAAGAAAGAG CATCTATATA TTTTATTACT
ACAAATGCAC CATGTACTAT GAGACCGCTT ATTGAAAGTA ACAATGCTTT TGCGTACTTA
GTTCAAGCTG TAAGAATTTA A
|
|---|
| Protein sequence | MKVICSKENL LNGINIVQKA VSTKTTLPIL EGILLNADDK FKLTGNDLEI GIECYVEADI
RSTGCIVINS KIFGDIVRRL PDSEVLIEVT GNNLVIVECE NSHFEIKGIN PSGYPSLPVV
EKENILELTQ SDLKDMIRQT VFAVGSDENR PVLTGSLIEV KDKELVIVSI DGFRLALRRK
NLENDINDFS VIVPGKTLNE ISKILQPTDE EVSVYSSNNQ VVFDAKSWRI VSRLIEGKFL
NYNSLLNKDF ETKVIINIKE FQSSLERASL ISMNDKNSPV KLFIGNDKII ITSNADLGNV
REEVKAEIEG NALEIGYNPA FLIDALKAID EERASIYFIT TNAPCTMRPL IESNNAFAYL
VQAVRI
|
|---|
| |