Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5381 |
Symbol | |
ID | 5897246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | + |
Start bp | 90598 |
End bp | 91692 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641550671 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001672157 |
Protein GI | 167621649 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.996751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTTA GGGATCATGC GAAGAGGCGG ACCTTGCCGG CGCTTGGCCT GGCGCTGACG ACGCTGGCCG GTTGCGGAGA ACACGGGAAA ACAGTCGATC GGGAACCGCC AGCGGTGCGT CTGCCGACCA CAGTGGTCCA GCGCGCCGAT CTGCCCGATT TCGTCGCCAT TCCCGGCGCC GTCACATCGG ACGACAGGGT CGATATTTCC TCGCGCGTCA CCGGTTATGT GCTCCTGATC GCCGTTCATG AAGGCCAATC CGTCCGGCGA GGCCAGGTAC TGGCGCGGAT CGACGCCAGA GAGATCGAAG AAGCGATACG ACAAGCGCGC GCCGGTCTTT CAGCCGCCCA GGCCGACCTT GCCCACGCCG AAGACGATGT CATCGCTCAG GAACCGCTGG CGCAGACGGG TGCGATATCG AGAGACGTGT TCCGTGGCGC CAGCTTGCGG CGTGACGTCG CGCGCTCGAC GGTCGCCAGG GCGCAGGCCG CGCTTGGCGC CGCCCAGGCC CAGCGGCCTT ATGTCACGAT CGCCAGCCCG ATCGACGGGG TCATTGTCGC CCGGCCCGGA CAAGCCGGAG AGTTGGCGAC GCCCGGGCGC ACGCTCGTCA CCGTGGAGGC GCGGCGCCGC CTGCTGTTCA AGATGTTTGT GCCGGAAACC GATGTCCGGC ACATTGCCGT CGATGCGCCG ATCGAGGTGC GCCTTGACCG CCTCAGCGAC CGCACCCTGA GCGGCGTCGT GCGTGGCATC GTACCGTCGG GCGATACCAC AACGCGGCGC TATGAGGTGG ATATCGCACT GCCCCCGGAC CCCGGTCTCA TGCCGGGCAT GTTCGGCCGC GCCCGGCTCG TGACCGGCCG AAGGCAATCG CCCCGGGTCC CGGCCAGCGC CATCGTCGAG CGCGGGGGAC TGACCGGTGT TTTCGTGGTT GGGAAGGACG GTCGCGTCGC CTTCCGGTGG TTGCGGACGG GCAAGGAGGC GGACGGATAC GTCGAGATCG CCTCGGGCTT GGGGGGCGGC GAGACGATCC TGGCTCGCGC CGATACTTCT GTGCGTGACG GCGCGAGATT GGTTCAAGGG CCGCGAACGC GATGA
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Protein sequence | MPFRDHAKRR TLPALGLALT TLAGCGEHGK TVDREPPAVR LPTTVVQRAD LPDFVAIPGA VTSDDRVDIS SRVTGYVLLI AVHEGQSVRR GQVLARIDAR EIEEAIRQAR AGLSAAQADL AHAEDDVIAQ EPLAQTGAIS RDVFRGASLR RDVARSTVAR AQAALGAAQA QRPYVTIASP IDGVIVARPG QAGELATPGR TLVTVEARRR LLFKMFVPET DVRHIAVDAP IEVRLDRLSD RTLSGVVRGI VPSGDTTTRR YEVDIALPPD PGLMPGMFGR ARLVTGRRQS PRVPASAIVE RGGLTGVFVV GKDGRVAFRW LRTGKEADGY VEIASGLGGG ETILARADTS VRDGARLVQG PRTR
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