Gene Caul_5297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5297 
Symbol 
ID5897077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp5701 
End bp7359 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content64% 
IMG OID641550590 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001672076 
Protein GI167621568 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTC AACCCACTGT TCCGCCCGAA ATTCACGCCG CCGAAGAGGT CGATGTCGTT 
GTGGTCGGGG CGGGCTTCAC CGGCCTCTAC CAACTCCACC GCCTTCGCCA ACTGGGGTTC
TCGGTGCGGC TGCTTGAGGC CGGCGCCGAT CTCGGTGGCA TCTGGTACTG GAACTGCTAC
CCCGGCGCTC GTGTGGACAC CCACGTCCCG ATGTACGAGT TCTCCAGCGA GGATCTCTGG
CGCGACTGGA CCTGGACCGA GCGATTCCCA GCCTGGGACG AACTGCGTCG CTATTTCCAT
TACGTCGATC AGAAGCTCGA TCTGAGCCGC GACATCCGAT TCAACACCCG AGTCGAAGGC
GCAGAGTTCG ACCGCGACCG CAACCAGTGG GTGGTCAGCA TCCTGGACGG CGGAGCCGTG
CGCGCAAGAT TCCTGGTGCT CTGCACGGGA TTCGCCGCCA AGCCCTATAT TCCGGACATC
GCGGGGCTGG AGCGGTTCGA AGGCGTCAAA CATCACACCG CGTGGTGGCC GCAGGACGGC
CTCGACATGA CGGACAAGCG CGTCGGCGTG ATCGGCACCG GCGCCAGCGG CGTGCAGGTC
GTGCAGGAGG CCGCACGCGT GGCCGCTCAG CTGACCGTCT TTCAGCGTAC GCCGATCCTT
GCCCTGGCCA TGCAACAGTG CAGCCTGGAC GAGGCAACCC AGCGCGACAT GAAGAGGGAT
TACCCCGCGC GGTTCGCGCG CCGGCGCGAG AGCTTCGGCG GCTTCGATTT CCACGCCAGC
GGCAAGTCCG CGCTTGAGGT CTCTCCGGAA GAACGGCAGG ACATCTATGA GGCGAGTTGG
GCGGCCGGAG GATTTAGTTT CTGGGCCTCG ACCTTCTACG ACGTGATGAT GAACCTCGAG
GCCAATCGCA CCGCCTACGA CTTCTGGCGC GAGAAGGTGC AGAAGCGGAT CCGCGATCCG
AAGCTCGCCG AAAAGCTTGC CCCGAAGCAG CCGCCGCACC CGTTCGGGGT CAAGCGCCCG
TCCCTTGAGC AGACCTACTA CGACGTCTTC AACCAGGACA ACGTCGAGTT GGTGGACCTG
AAGGAGACGC CAATCCTGGA GGTCACCCCC GGCGGCGTAA AGACCGCAGA GCGGGAGTAC
GAGCTCGATC TCCTGGTTCT TGCCACCGGC TTCGATGCCG TGACCGGCGG CCTGACGCAG
ATCGACATCC GCGGTGTCGA GGGGCTCACG CTCAAGGAGA AGTGGGCCAA GGGCGCGCGA
ACTCACCTGG GCATGGCCAG CGCTGGCTTT CCCAACCTGC TGTTCCTCTA CGGGCCGCAG
AGCCCCTCGG GGTTCTGCAA TGGCCCGACC TGCGCCGAAC TGCAGGGCGA CTGGGTGGTC
GAATTCCTGG GACGCATGCG CGACGCGGGC GTCAGCCGGT TCGAGGCGAC CACCGCCGCC
GAACAGACCT GGAAGGACCA TGTCGAGGCG GTTGGCGCCA TGACGCTCTT TCCCCTGGCT
GACTCCTGGT ACATGGGTGC TAATATTCCG GGTAAGCCAC GGGAATTATT GAATTATCCG
GGCGGTGTTC CACTGTACCT GCAGATGTGT CAGGCCAGCG CCGACAAGGG TTATGAGGGG
TTTGTCCTAG GGACCCGAGG TGCCCGTCAT CTTGATTGA
 
Protein sequence
MKTQPTVPPE IHAAEEVDVV VVGAGFTGLY QLHRLRQLGF SVRLLEAGAD LGGIWYWNCY 
PGARVDTHVP MYEFSSEDLW RDWTWTERFP AWDELRRYFH YVDQKLDLSR DIRFNTRVEG
AEFDRDRNQW VVSILDGGAV RARFLVLCTG FAAKPYIPDI AGLERFEGVK HHTAWWPQDG
LDMTDKRVGV IGTGASGVQV VQEAARVAAQ LTVFQRTPIL ALAMQQCSLD EATQRDMKRD
YPARFARRRE SFGGFDFHAS GKSALEVSPE ERQDIYEASW AAGGFSFWAS TFYDVMMNLE
ANRTAYDFWR EKVQKRIRDP KLAEKLAPKQ PPHPFGVKRP SLEQTYYDVF NQDNVELVDL
KETPILEVTP GGVKTAEREY ELDLLVLATG FDAVTGGLTQ IDIRGVEGLT LKEKWAKGAR
THLGMASAGF PNLLFLYGPQ SPSGFCNGPT CAELQGDWVV EFLGRMRDAG VSRFEATTAA
EQTWKDHVEA VGAMTLFPLA DSWYMGANIP GKPRELLNYP GGVPLYLQMC QASADKGYEG
FVLGTRGARH LD