| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5274 |
|---|
| Symbol | |
|---|
| ID | 5897458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | - |
|---|
| Start bp | 213701 |
|---|
| End bp | 214804 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641555377 |
|---|
| Product | glycosidase PH1107-related |
|---|
| Protein accession | YP_001676708 |
|---|
| Protein GI | 167621923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2152] Predicted glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000268053 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC GCGCGACCGT GCCAGATTGG GCCATCGGCC CGTTTTCGCC ACCCCAACGG
ATCCTGGGTC CGCGACCGGA CCTGCGCTTT GACTGTCCTG TCTCGGGCGA CGCCGTCGCT
TGGGCCGCCA AGGACGTGTT CAACGCCGGC GCGGTCGTCC ACGAGGGCCG GGTCTGCCTT
CTGGTGCGGG CTGAAGACAC CGTTGGCCGA TACGCTGGCG TCTCGCGCAT CGGGCTGGCC
ACTAGCGCCG ACGGCGTGAC GTTCGACCTT GAGTCCAAGC CGGTCCTTTA TCCGGACGAC
GACCGCTGGC AGGCCTGGGA GTGGCCGGGG GGCCTGGAGG ATCCGCGTAT CGTGGTCGGG
CCCGACGGCA CGTTCGTCTG CGCTTACACC GCGTTCGACG GGAAGGTCGG CTGCTTGTTC
ATCGCCACCT CCCGCGATCT TCGCCAGTGG ACCAAGCACG GTCCGGCCTT TGCCGGGTCG
CCCTATGCGC GCCTGGCCAC CAAGGCCGGC GCAATCGTCA CCGAGCTGGT CGAGGGGCGA
CTGGTGGCCG CGCGCATCGA CGGCCGCTAT TGGATGTACT GGGGCGAGGG CGCGCTTTAT
GCGGCGACCT CCGAGGACCT GGTGCGCTGG ACCCCGGTGG AAGCCGACAG CGCGCCGGAC
AAGTACCTGA CTTGGGATCC CGAACACCGC GGCCCGATGG GCGCCTGGAC CTTGGAACGT
CCACCTGGAC CCAGGGGCGT CCGCCTCCTG GCGGGACCGC GCAGGCATCG CTTCGATTCC
CTGTTGGTCG AGCCAGGCCC GCCGGCGATC TTGACGCCTG AGGGCGTGGT TCTGATCTAC
AACGGCGGCA ATCACGTGGT GGATGGCGAC CCCGACATCG AGCCCTTCGC CTATCAGCCC
AGCCAGATGC TGTTCGACGC CCGCGATCCC ACGGCCCTGA TCGCCCGGGC GCGCGAGCCG
TTCCTGGGTA TTCCCAGGCA CGAGGCCGAG GGGCAGGTGG GCAACGTCTG TTTCGCGCAG
GGTCTGGTGA CCTTCCAGGG GCAATGGCGA CTTTATCTGG GCCTTGCCGA CTCCAGGCTG
GGGGTTTCCA CAGCGCCATT CTGA
|
|---|
| Protein sequence | MTKRATVPDW AIGPFSPPQR ILGPRPDLRF DCPVSGDAVA WAAKDVFNAG AVVHEGRVCL
LVRAEDTVGR YAGVSRIGLA TSADGVTFDL ESKPVLYPDD DRWQAWEWPG GLEDPRIVVG
PDGTFVCAYT AFDGKVGCLF IATSRDLRQW TKHGPAFAGS PYARLATKAG AIVTELVEGR
LVAARIDGRY WMYWGEGALY AATSEDLVRW TPVEADSAPD KYLTWDPEHR GPMGAWTLER
PPGPRGVRLL AGPRRHRFDS LLVEPGPPAI LTPEGVVLIY NGGNHVVDGD PDIEPFAYQP
SQMLFDARDP TALIARAREP FLGIPRHEAE GQVGNVCFAQ GLVTFQGQWR LYLGLADSRL
GVSTAPF
|
|---|
| |