Gene Caul_5187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5187 
Symbol 
ID5897324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp105081 
End bp105632 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID641555290 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001676621 
Protein GI167621836 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.572123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG ACATCGTCCT GAGAAAGGCC GCCCAAGCCA AGGCCGCGAG TCCTGAGACC 
ACGGCCGACC TGGATGGGCT GTTTCGGATC GAGGGTCCGC AGCTCTTGCG CTACTTCGCG
CGACGTCTGG GGCCGGAGGA CGCCAAGGAC CTGGCGCAAG AGACTTTTCT GCGCTTTGCC
AGCCTGGCCG CGCCCCAGGC TCTGGACAAC CCTGCGGCCT ATCTGCAGCG CATCGCTCGC
AACCTCCTGC GCGACCGCGC CAAGAACGCC ACGGCGGCGC GGGAACGCAC GCACCTGACG
CTTGAGCCGG AGCTGCACGC GGCCAACGAC GGCGACCCGC ACCAGGCGCT GGTGGCGCGC
CAGACCCTGG AGCGCTACGA AGCCGCCCTG ATGAAATTGA AGCCCAAGAC CCGCGAGATC
TACTTGCGCC ACCGTCTCGA TGGCGTCAGC TACGAACTGA TCGCCCAGGA ATGGAACATG
AGCGTCAGCG GGATCGAAAA GCAGATGATG AAGGCCATGG CCCACATCGA CCGCCACCTG
AGCCGGCGCT AA
 
Protein sequence
MSSDIVLRKA AQAKAASPET TADLDGLFRI EGPQLLRYFA RRLGPEDAKD LAQETFLRFA 
SLAAPQALDN PAAYLQRIAR NLLRDRAKNA TAARERTHLT LEPELHAAND GDPHQALVAR
QTLERYEAAL MKLKPKTREI YLRHRLDGVS YELIAQEWNM SVSGIEKQMM KAMAHIDRHL
SRR