Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5187 |
Symbol | |
ID | 5897324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010335 |
Strand | + |
Start bp | 105081 |
End bp | 105632 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641555290 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001676621 |
Protein GI | 167621836 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.572123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGG ACATCGTCCT GAGAAAGGCC GCCCAAGCCA AGGCCGCGAG TCCTGAGACC ACGGCCGACC TGGATGGGCT GTTTCGGATC GAGGGTCCGC AGCTCTTGCG CTACTTCGCG CGACGTCTGG GGCCGGAGGA CGCCAAGGAC CTGGCGCAAG AGACTTTTCT GCGCTTTGCC AGCCTGGCCG CGCCCCAGGC TCTGGACAAC CCTGCGGCCT ATCTGCAGCG CATCGCTCGC AACCTCCTGC GCGACCGCGC CAAGAACGCC ACGGCGGCGC GGGAACGCAC GCACCTGACG CTTGAGCCGG AGCTGCACGC GGCCAACGAC GGCGACCCGC ACCAGGCGCT GGTGGCGCGC CAGACCCTGG AGCGCTACGA AGCCGCCCTG ATGAAATTGA AGCCCAAGAC CCGCGAGATC TACTTGCGCC ACCGTCTCGA TGGCGTCAGC TACGAACTGA TCGCCCAGGA ATGGAACATG AGCGTCAGCG GGATCGAAAA GCAGATGATG AAGGCCATGG CCCACATCGA CCGCCACCTG AGCCGGCGCT AA
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Protein sequence | MSSDIVLRKA AQAKAASPET TADLDGLFRI EGPQLLRYFA RRLGPEDAKD LAQETFLRFA SLAAPQALDN PAAYLQRIAR NLLRDRAKNA TAARERTHLT LEPELHAAND GDPHQALVAR QTLERYEAAL MKLKPKTREI YLRHRLDGVS YELIAQEWNM SVSGIEKQMM KAMAHIDRHL SRR
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