Gene Caul_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5153 
Symbol 
ID5897351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp71251 
End bp71982 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID641555256 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001676587 
Protein GI167621802 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.270613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGT TGGACGGCAA GATCGCGGTG ATCACCGGCG CCAGCGCGGG CATGGGCCTG 
GCCGCGGCCA AGCGGTTCGT CGCCGAGGGC GCCAAGGTGG TGATCACGGG CCGCGACCAC
GCGCGCCTTT CCGCCGCCGC CGAGGCGATC GGCGGCGAGG TGGCCACCGT GCGCGGCGAC
GTCGCGCAGC TTTGCGACCT GGATACCCTC TTCAACGCCG TCGCCGCCCT GCATGGTCGG
ATCGACGTGC TCTACGCCAA CGCCGGCGCG GCGGCGAGCG CGCCGCTGGG CGAGATCACC
GAAGCTCATT TCGACGCCAT CGTCGGGGTC AATCTGCGCG GTACGCTGTT TAGCGTGCAA
AAGGCCCTGC CGCTGCTCAG CGACGGCGCC TCGATCATCG TCAAGGGCTC GATCGCCGGC
GTTCGCGGAC GCGCCGGACG CGGCGTCTAC AACGCCAGCA AGGCGGCGCT GGGCGCCTTG
GTGCGCACCT GGGCTCAAGA GCTGAAGCAC CGCCGCATCC GGGTCAACCT TCTGGTTCCC
GGGCCGACCG ACACAGACGC CTTGGCCGGC GCGCCGCCCG AGGTCCGCGC TTTCCTGGCC
GGGCAGGTCG TTCGCGGCAC GATCGCCCAG CCCGACGAAA TCGCCAATGC GGCCCTTTTC
CTCGCCAGCG ACGAATCCAG CTTCGTCAAC GCCAGCGAGG TCTTTGTCGA CGGCGGGGCG
GCTCAAATCT GA
 
Protein sequence
MGRLDGKIAV ITGASAGMGL AAAKRFVAEG AKVVITGRDH ARLSAAAEAI GGEVATVRGD 
VAQLCDLDTL FNAVAALHGR IDVLYANAGA AASAPLGEIT EAHFDAIVGV NLRGTLFSVQ
KALPLLSDGA SIIVKGSIAG VRGRAGRGVY NASKAALGAL VRTWAQELKH RRIRVNLLVP
GPTDTDALAG APPEVRAFLA GQVVRGTIAQ PDEIANAALF LASDESSFVN ASEVFVDGGA
AQI