Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5153 |
Symbol | |
ID | 5897351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010335 |
Strand | - |
Start bp | 71251 |
End bp | 71982 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641555256 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001676587 |
Protein GI | 167621802 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.270613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGGT TGGACGGCAA GATCGCGGTG ATCACCGGCG CCAGCGCGGG CATGGGCCTG GCCGCGGCCA AGCGGTTCGT CGCCGAGGGC GCCAAGGTGG TGATCACGGG CCGCGACCAC GCGCGCCTTT CCGCCGCCGC CGAGGCGATC GGCGGCGAGG TGGCCACCGT GCGCGGCGAC GTCGCGCAGC TTTGCGACCT GGATACCCTC TTCAACGCCG TCGCCGCCCT GCATGGTCGG ATCGACGTGC TCTACGCCAA CGCCGGCGCG GCGGCGAGCG CGCCGCTGGG CGAGATCACC GAAGCTCATT TCGACGCCAT CGTCGGGGTC AATCTGCGCG GTACGCTGTT TAGCGTGCAA AAGGCCCTGC CGCTGCTCAG CGACGGCGCC TCGATCATCG TCAAGGGCTC GATCGCCGGC GTTCGCGGAC GCGCCGGACG CGGCGTCTAC AACGCCAGCA AGGCGGCGCT GGGCGCCTTG GTGCGCACCT GGGCTCAAGA GCTGAAGCAC CGCCGCATCC GGGTCAACCT TCTGGTTCCC GGGCCGACCG ACACAGACGC CTTGGCCGGC GCGCCGCCCG AGGTCCGCGC TTTCCTGGCC GGGCAGGTCG TTCGCGGCAC GATCGCCCAG CCCGACGAAA TCGCCAATGC GGCCCTTTTC CTCGCCAGCG ACGAATCCAG CTTCGTCAAC GCCAGCGAGG TCTTTGTCGA CGGCGGGGCG GCTCAAATCT GA
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Protein sequence | MGRLDGKIAV ITGASAGMGL AAAKRFVAEG AKVVITGRDH ARLSAAAEAI GGEVATVRGD VAQLCDLDTL FNAVAALHGR IDVLYANAGA AASAPLGEIT EAHFDAIVGV NLRGTLFSVQ KALPLLSDGA SIIVKGSIAG VRGRAGRGVY NASKAALGAL VRTWAQELKH RRIRVNLLVP GPTDTDALAG APPEVRAFLA GQVVRGTIAQ PDEIANAALF LASDESSFVN ASEVFVDGGA AQI
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