Gene Caul_5142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5142 
Symbol 
ID5897376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp61807 
End bp63606 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content68% 
IMG OID641555245 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001676576 
Protein GI167621791 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.367406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.838811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG TAGATCTCAA GGTCTCCAAG AAGATCCTGT CGGCGTTCGC CGCGCTGATC 
GCCCTGTCGG CGGTCGGTGA TGCGATCGTC CTGGCTCAAC TGAGGGCGAT CGACCGCTCG
GCGCGGCTCA ACGACCAGGC TTTTGACCTG TCCAGCGACG TGCGGACGAT CAAGAGCGGG
TTGGTCGAGC AACAGAACGC CATTCGCGGC TACGTGATGT CGGGCAACGC GACGTTCCTG
GACACCTACC GCCAACAGGC GGCCGCCACC CAGACCGCCC TGGATCATTT TGCGTCGAAC
GCCCAAAGCC CTGGCCAGCG CGAGCAGGCC GAGGTCCTGA AGGGGAAGAT CGACGCCTGG
CGGGTTCAAT ACGGCGATCG GCCTCTGGCG CTGAGCGATG ACGCCGCCAC TCACGATCAG
GCCATGGCGA TCATGAGCAC CAAGACCTTG GGTGAGTTGC GCACCGCGAT CGATGCGTTG
GAGACCGAGC AAGCCCGGGT CCAGGACGCT CGCTTCGTCC ACGAGACCCA AGCCATCCTC
ATCGGGCAGG TCGCTCTGGC GCTCGGGGCG GTGCTGGCCA TGGCCGCTTC GCTGAGCATG
GCCCGGCTGC TGGGGCGTTT GGTCGCCGCG CCGATCGTGC GCATGACGCA GGCGATGCGC
CGACTGGCTC AAGGCGACCT CACCATCGAG GTGCCAGATG GCACTCGCGG CGACGAACTG
GGCGAGATGG CCGCCGCCGT CGAGCACTTC AAGGCCGCCG CCATCGAGAA GCTGCGCCTT
GAAGGCGAAA GCCGCGAGGT GGAAGCTGCG CAGATCGCCG CGGCCAAGGC CGAGGCCACG
CGCCAGCAGG CCTTCGTCGT CGACGCCTTG GCGCAGGGGC TGGAAAAGCT GGCCGCTGGC
GAGCTGACCT GGCGGGTCAA CGAGCCCTTC CCCCTCGAAT ACGAGAAGCT GCGCGGCGAC
TTCAACGCCG CCATGGGCCG ACTGCAGGAG ACCATGGGCG TCATCGCCCG GGCCGCCGAC
GGCATTCGCG CCGAGACCGG AGAGATCAGT CAGGCGGCCG ACGATCTGTC GGCCCGCACC
GAGCGCCAGG CCGCGAGCCT GGAGCAAACC GCCGCGGCGC TGGATCAGGT CACCGCCACC
GTGCGACGCA CGGCCGACTG GGCCAGTCAG GCCCTCGGCG TGGCCAAGTC GGCCCGCGGC
GAGGCCCAGT CGTCTGGGGG CGTGGTGCGT GACACGGTCG GCGCCATGGG CCGCATCGAA
CGATCGTCCC AGCAGATTGG CCAGATCACC GGTCTAATCG ACGAGATCGC CTTCCAAACC
AACCTTTTGG CCCTCAACGC CGGAGTAGAG GCCGCCCGGG CCGGAGACGC GGGTCGCGGC
TTCGCCGTCG TCGCCCAGGA AGTGCGGGCC CTGGCCCAGC GCTCGGCCGA GGCCGCCAAG
GAGATCAAGG CCCTGATCGC CGCCTCCAGC GACCAGGTCG CCGCCGGCGC CAACTTGGTG
GGTCAGACCG GGGCGGCTCT TGAACGCATC GTCCAAAGAG TGGGTGAACT GGACGGGGTG
ATCGGCGACA TCGCCGCCTC GGCCCAGGAG CAGGCGCTGG GCCTTCAGCA GGTCAACACG
GCCGTCAACC AGATGGATCA GATCACCCAG CAGAACGCCG CCATGGTGGA GCAGTCGACC
GCCGCCAGCC ATGGCGTGGC GCGCGAAGCC GAGGGGCTGA GCCGTCTGAT GGGCGGCTTC
CAACTCGATG GCGAGAGCAA ATCCCGCGTC CGGCCGCGCC TGCGCGCGAT CGCCGGATGA
 
Protein sequence
MALVDLKVSK KILSAFAALI ALSAVGDAIV LAQLRAIDRS ARLNDQAFDL SSDVRTIKSG 
LVEQQNAIRG YVMSGNATFL DTYRQQAAAT QTALDHFASN AQSPGQREQA EVLKGKIDAW
RVQYGDRPLA LSDDAATHDQ AMAIMSTKTL GELRTAIDAL ETEQARVQDA RFVHETQAIL
IGQVALALGA VLAMAASLSM ARLLGRLVAA PIVRMTQAMR RLAQGDLTIE VPDGTRGDEL
GEMAAAVEHF KAAAIEKLRL EGESREVEAA QIAAAKAEAT RQQAFVVDAL AQGLEKLAAG
ELTWRVNEPF PLEYEKLRGD FNAAMGRLQE TMGVIARAAD GIRAETGEIS QAADDLSART
ERQAASLEQT AAALDQVTAT VRRTADWASQ ALGVAKSARG EAQSSGGVVR DTVGAMGRIE
RSSQQIGQIT GLIDEIAFQT NLLALNAGVE AARAGDAGRG FAVVAQEVRA LAQRSAEAAK
EIKALIAASS DQVAAGANLV GQTGAALERI VQRVGELDGV IGDIAASAQE QALGLQQVNT
AVNQMDQITQ QNAAMVEQST AASHGVAREA EGLSRLMGGF QLDGESKSRV RPRLRAIAG