Gene Caul_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5107 
Symbol 
ID5897337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand+ 
Start bp25718 
End bp26395 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID641555210 
ProductTetR family transcriptional regulator 
Protein accessionYP_001676541 
Protein GI167621756 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.346129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC ATCAAGACCA AACCGCTCGA GATCTATCGC CGCCTCGCCA GGGCGTATCG 
CTACGCACCC CGGGCGCCAT GTCGGTGACC AAGGCGCGCC TGATGCGCGC CGCCACCGAT 
CTGTTCTACG AACAGGGTGT GCGGGCGGTG TCGATCGATG ACATCGTCGC GGCGGCCGAT 
GTCACCAAAC CCACCCTCTA TCGGCTATTC GCCTCCAAAG ACGCCTTGCT CACGGCCTGC 
GTCGCCGCCG ACAGCATTCG TCTGTGCGCC GAACTTGAAG AGGTCATCGA GCAGGCGCCG 
GCCAACCCGG TCGATCAGGT CGCGGCCGTG GCCCGGCACT ACGCCGAGGC GATGCGGGCT 
GAGCACCATC GCGGGATCCT GGCGGCCAAT GTCGCGGTCG AGTTTCCCGA TCCAGATCAC 
CCCGTGCGCG CCGTCGTGGC CCAGGCCACC GCGCGGTTTC ACGCCCGTCT AGGAGAGCTT 
CTGGCGCCGC TGGCGGGCCC GGCCTCAGGC GCTGCGGCCT CACATCTGGT GCTGGTGATC 
CTGGGCGCGT GCAATGTCCG CCAGGCCCTG GGCGGGCCGG TGGCCGCCGA TGCGCTGCTG 
TGCGCTGTGG ACTCGGTCAT GGCCTGCGTC GCCGAGCGCG CCAAGGCCGC GCCCGCCCGG 
GAGGTGGTCT GGGTGTAA
 
Protein sequence
MTNHQDQTAR DLSPPRQGVS LRTPGAMSVT KARLMRAATD LFYEQGVRAV SIDDIVAAAD 
VTKPTLYRLF ASKDALLTAC VAADSIRLCA ELEEVIEQAP ANPVDQVAAV ARHYAEAMRA 
EHHRGILAAN VAVEFPDPDH PVRAVVAQAT ARFHARLGEL LAPLAGPASG AAASHLVLVI 
LGACNVRQAL GGPVAADALL CAVDSVMACV AERAKAAPAR EVVWV