| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4853 |
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| Symbol | |
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| ID | 5902315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 5250406 |
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| End bp | 5253879 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641565373 |
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| Product | double-strand break repair helicase AddA |
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| Protein accession | YP_001686471 |
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| Protein GI | 167648808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.744046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC CCCAGCGCAT CGCCGCCGAT CCCGCGATCT CGGCCTTCGT CACGGCCAAT
GCCGGCTCGG GCAAGACCAA GACCCTGATC GACCGGGTCG CGCGCCTGTT GCTGGCCGGC
TCGTCGCCCG AGGCGATCCT GTGCGTCACC TACACCAAGG CCGCCGCCGC CGAGATGCAG
CGGCGATTGT TCGAGCGCCT GGGCGAGTGG TGCGTCACCC CCGACGTCAA GCTGCGCGAG
CAGCTGGGCG CCCTGGAGGG CCGCGAGCCG GCCAGCTTCG ACCACCGCGA ACTGTCCAAG
GCCCGGGGCC TGTTCGCCAA GGCGCTGGAG ACGCCGGGCG GGCTGAAGAT CCAGACCATC
CACGCCTTCT GCGAGAAGCT GCTGCGGCGC TTCCCGCTGG AGGCCGGCGT CTCGCCCGGC
TTCACGGTGA TGGACGACAG CGCCTCGGCC GCCATCGCCC AGGGCGCGCT GCGGCAGGTG
GCGACCTGGG TCACCGACCA CGACGACGCC TTCGCCCAGG CCTATGCCCG GTTCTCGGTG
GCGCTGGACT TCGCCAGCTT CGAGGCGATG TTCGCCACCT TCGAGAGCCA GCGCGGGGCG
ATCGGCGAAT ACCTGGAAAG CGTGGGCGGC CTGCAGGGCG CGGTCGAGGA CGTCTGGAAG
GTCTGCGGCT TCCACTACGG GGCCAGCAGC GTCGAGGCCG TCATCGCCGA GGCCATGGCC
GAGCTGGACC GCGACCTCTG GCGCTCCATC GCCGACGTGC TGCTGAACGG GACCAAGACC
GACATCAAGT GCGCGGGCCA GATGATGGCC GTGGCCGCCG ACCCGCACGC CGATCTCGAC
CAGGCCCTGG CGGCGCTGTT CACCGAGAAG GGCGCCGGCA CGCCGGCGAC TTGGCCGGCC
AAGACCTCGG GTCTCAAATC CCGCGAAGAC CTGCGCGCCC GGCTGCTGGC TGAGCAGGAA
CGGCTGGAGG AGGCCCGCGA ATGGCTGCGC GCCGCCCGCG TGGCCGAGGA CAGCAGCGAC
GCCTTGCGCC TGGCCGGGCT CTACATCCAG GCCCACGGGG TCGAGAAGGC CGCACGGGGG
GCGCTCGACT TCGCCGACCT GATCGACAAG ACCAAGGTGC TGCTGACCCA GAAGGTCGAC
GCCGCCTGGG TGCTCTACAA GCTGGACGGC GGCATCGACC ACATCCTGCT GGACGAGGCC
CAGGACACCG CCCCCGAGCA GTGGGCGATC CTGCGGGCCC TGACCTCCGA CTTCTTCGCC
GGCGAGGGCG CAGTCCGCTG GCGGGCGGAA CATTCGACCC AGGCCCAGGA CGCCCGCACC
CTGTTCGTGG TCGGCGACGA GAAGCAGTCG ATCTATTCGT TCCAGGGCGC CGCCCCCGAA
CGCCTGCTGG CCGAGACGCA AGCCTATATC GCCCAGATCA CCGACGTCGG GCGTGTGGGC
AAGCATGTGC CGTTGATCAC CTCCTACCGC TCGACGGTCG AGGTGCTGAG CTTCGTGGAC
GCCCTGTTCT CGGCCCCGGA GACCCGCTCG GGGGTTCCGG CCCCAGCCGG CGAGGACCTG
GTGCGCCACC AGCCGTTCCG CATCGATCAC AAGGGCTGCG TCGACCTGTG GCCGCTGGAG
CGCGAACTGC CTGGCGAGGA GCGCGAGGCC TGGGACGCGC CGCTGGACGC CGAGAGCGAG
CATGGCGCCA ATCGCCGGCT GGCCGAGAAG ATCGCCGTCG AGATCCAGGC CCTGATCCGC
CGGGGCGACG TGGTGTTCGA CAAGGAGACC CGGGAATGGC GTCCGGCCCA TCCGGGCGAC
ATCCTGGTGC TGGTGCGCCG CCGCAAGGCG CTGTTCGAGG AGGTGCTGCG GGCCCTGAAG
CGCCGCGGCG TGCCGGTGGC CGGCGCCGAC CGCCTGAGCC TGTCGGCCCA CATCGTGTTC
GACGACCTGT TGGCCCTGGG CAGGTTCTGC CTGTTCCCCG ACGACGACCT GACCCTGGCC
GCCCTGCTCA AGAGCCCGTT CTGCGGCCTC TCGGACGACG ACCTCTACGG CCTGGCCAAG
GGCCGCCAGG GGACCCTGTG GGCGGCGCTG GACGCCCGGG CGGTCGAGCA TCCGAAATGG
ACCGCCGCCC ACGCCCTGCT GCGCTGGGCG CTGACCGAGT CGCGGCGCCG GCAGCCGTTC
GAGTTCTACG CCCTGCTGCT GGGCCGGGTG GACGAGACCA CGCGCTCGAA CCGCGCCAAG
GTGCTGACCC GCCTGGGCGA GGAGGCCGCC GAGGCCCTGG ACGAGTTCCT GGCCCAGATC
CTGGCCGCCG AGCAGCGCGG GGTGCGCGAC CTGGAGGCCC TGGTCGCCGA TTTCGCCAGC
CTCGACATCA TCGTGAAACG CGAGATGGAG GGCGCGCGCC AGGAGGTGCG GGTGATGACC
GCCCACGGCG CCAAGGGCCT GGAGGCGCCG ATCGTCTTCC TGCCCGAGAC GACGATGAAG
GGCGGAGCGC GCGGCTCGCC GCTGATGCGG ACCGACCAGG GCGGCTTCCT GTGGTGCGCG
TCGAAGGCCA ACGACTGCGA GCCGTCGGCC ATGGCCCGCG AGCGCCGCGA GAAGAAGGAC
GCCGAGGAGG CCCTGCGCCT CTATTACGTG GCCCTGACGC GAGCGCGGGA CCGGCTGATC
CTGTGCGGCC GCATCGATGC CCGCACCAAG GACGAGACCG TCGGCGGCTG GTACGCCGCC
GCCCGGGCCG CCTTCGCCCA TCCCGACATC GAGCCGGGGG TGCGCGAGAT CAGCGAGGAC
GGCCGCCTGC GCTTCGGACC CGATCCGATG CGCGCCGAAG CCGCCGCGCC ATCCGCCGCG
CCAGCCCCGA TCCCGACGCC CGCCTGGACC CTGGCCCCGG CCCGCCCCGA GACCCCGGCC
GCCCGCTACG CCGCCCCCTC GACCCTGGAG GACGAGGCCC GGGGCAGCGC GCCCTCGCCG
CTGGCGGCGG TCTCGGGCCT GGGTCGCTAC CGGCGCGGCG AGATCATCCA CCGGCTGCTG
CAGCTTCTAC CCGACATAGA GCCCATGGGT CGCGGGACGG CCGCCAACCG CCTGCTGGCC
GCCGAGCGCG ACCTGACCGA CGAGCAGCGC GGCGAGATGG CGGCGGCGGC CTTCGGGGTG
CTGGAGGACG ACCGCTTCGC CGAGGTCTTC GGCCCGGGCT CGCGCGCCGA GGTGTCGGTG
GCCGGCGGCG CGGCCAAGCT GCCGCCCGGC CTGGCCATCT CGGGCCGCGT CGACCGCCTG
GTGGTCACGC CGGATCGGGT GCTGGTCGTC GACTACAAGA CCAATCGACC CTCGCCGGCC
CGCATCGAGG ACGCCGATCC GGCCTATCTG TCGCAGATGG CGGTCTATGC CGCGGTGCTG
GCCGAGGTGT TCCCGGGCCG GCCGATCGAG GCGGCGATCG TCTGGACCGA CGGTCCCAAA
CTCATGGCGG TTCCAGAAAA GGTGATGGCC GCCGCGCTGG CCCGGCTGTT CTAG
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| Protein sequence | MIDPQRIAAD PAISAFVTAN AGSGKTKTLI DRVARLLLAG SSPEAILCVT YTKAAAAEMQ
RRLFERLGEW CVTPDVKLRE QLGALEGREP ASFDHRELSK ARGLFAKALE TPGGLKIQTI
HAFCEKLLRR FPLEAGVSPG FTVMDDSASA AIAQGALRQV ATWVTDHDDA FAQAYARFSV
ALDFASFEAM FATFESQRGA IGEYLESVGG LQGAVEDVWK VCGFHYGASS VEAVIAEAMA
ELDRDLWRSI ADVLLNGTKT DIKCAGQMMA VAADPHADLD QALAALFTEK GAGTPATWPA
KTSGLKSRED LRARLLAEQE RLEEAREWLR AARVAEDSSD ALRLAGLYIQ AHGVEKAARG
ALDFADLIDK TKVLLTQKVD AAWVLYKLDG GIDHILLDEA QDTAPEQWAI LRALTSDFFA
GEGAVRWRAE HSTQAQDART LFVVGDEKQS IYSFQGAAPE RLLAETQAYI AQITDVGRVG
KHVPLITSYR STVEVLSFVD ALFSAPETRS GVPAPAGEDL VRHQPFRIDH KGCVDLWPLE
RELPGEEREA WDAPLDAESE HGANRRLAEK IAVEIQALIR RGDVVFDKET REWRPAHPGD
ILVLVRRRKA LFEEVLRALK RRGVPVAGAD RLSLSAHIVF DDLLALGRFC LFPDDDLTLA
ALLKSPFCGL SDDDLYGLAK GRQGTLWAAL DARAVEHPKW TAAHALLRWA LTESRRRQPF
EFYALLLGRV DETTRSNRAK VLTRLGEEAA EALDEFLAQI LAAEQRGVRD LEALVADFAS
LDIIVKREME GARQEVRVMT AHGAKGLEAP IVFLPETTMK GGARGSPLMR TDQGGFLWCA
SKANDCEPSA MARERREKKD AEEALRLYYV ALTRARDRLI LCGRIDARTK DETVGGWYAA
ARAAFAHPDI EPGVREISED GRLRFGPDPM RAEAAAPSAA PAPIPTPAWT LAPARPETPA
ARYAAPSTLE DEARGSAPSP LAAVSGLGRY RRGEIIHRLL QLLPDIEPMG RGTAANRLLA
AERDLTDEQR GEMAAAAFGV LEDDRFAEVF GPGSRAEVSV AGGAAKLPPG LAISGRVDRL
VVTPDRVLVV DYKTNRPSPA RIEDADPAYL SQMAVYAAVL AEVFPGRPIE AAIVWTDGPK
LMAVPEKVMA AALARLF
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