Gene Caul_4305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4305 
Symbol 
ID5901766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4678398 
End bp4679636 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID641564823 
Productcell wall hydrolase SleB 
Protein accessionYP_001685923 
Protein GI167648260 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCC TAGGTCAAGC GAGGGTCGCC AAGGTCGGCG CCGCGCTCTT CGCCGTCGTC 
GGCCTTTCGA CCTGCGTGAC CTATTCCGTC CCGCCCGGGA CGGGGCGTCC CGCCGGCGTC
GCCACGATCA CCAGGACGCT GTCGGACGCC GGCCTCGCCC ACTACACGGC CGACATGGAC
CTGGCCATGC TGGCCCTGGC CCGGCGCCAC GACCCGAGGC CGCATCGGGA CGACTGGGGC
CGGGTGCGGG GCTGGGAGCA GTTGAACCTG CACCTGATCC CGCGGCTGGG CGACCGCGAC
CCGGACTTCG AGGAGGCCCG GGTGATCAAC CGCTTCAAGC GCGAGGCCCC GCTGGCGCTG
GAGCCGTCCC GGCCGTTCGT CCTGACGGGG GCGGTCTCGG AGCGCGAGAA GGCCCTGCGC
TGCATGACCC AGGCGGTCTA TTTCGAAGCC GGCTTCGAGC CTTTGGACGG CCAGCGCGCG
GTGGCCCAGG CGGTGATCAA CCGGGTGCGC CACGCGGGCT ATCCCAAGTC GATCTGCGGG
GTGGTCTATG AAGGGGCGGC GCGGCGCACG GGCTGCCAGT TCAGCTTCAC CTGCGACGGC
TCGCTGCAAC GGGCCATCAG CCCGGTGGTG TGGCGCAACG CCGAGATCAT CGCCAAGCGG
GCCCTGTCCG GCTTCGTGAT GAAGGAGGTC GGCGCCGCCA CCCACTACCA CGCCGACTAC
GTCTATCCCT ACTGGGCGCC GACCTTGGTC AAGCTGCGGA CGGTGGGGAC CCACGTCTTC
TATCGCTGGA CCGGGCCTTC TGGCGCTCAA AGGGCGTTCA ACGGCCGTTA TTCGGGCCGC
GAGACGGTGT CGGCCGACAT CCTGATGGGC GCCGACCCGC GCACGCTGGA GGCCGCGCCC
GCCGATGTCC TGGCCCAGGC CGAGGCGGAA ACCAAGGCCC AGGCCCAGGC GCTCGGCCTG
GCTCCCACGC CGACCGGCGA GGCGGCCCAG ATCGTCGGGG CCGACGGCGT GGTCGAGGTC
CTGGCCCCGA TCGCCGGCGA CCCGACCGCC GCCATGCGCG GCGGCCGGCG CGCGCCGACG
CGCGAGGAGA TCGCCAGGAT CAACAAGGTG CTCGAGACGC CCGAGGTCGC CGCCCCGGCG
GCCGCGCCGC CCGTGGCGAC TCCGCCGCCG CCGCCGCCAG CGCCGCCGAA ACCCAAGCCC
AAATCAAGGG CGGTTGAGCC GCTGCCCTGG AGTTTTTAG
 
Protein sequence
MSGLGQARVA KVGAALFAVV GLSTCVTYSV PPGTGRPAGV ATITRTLSDA GLAHYTADMD 
LAMLALARRH DPRPHRDDWG RVRGWEQLNL HLIPRLGDRD PDFEEARVIN RFKREAPLAL
EPSRPFVLTG AVSEREKALR CMTQAVYFEA GFEPLDGQRA VAQAVINRVR HAGYPKSICG
VVYEGAARRT GCQFSFTCDG SLQRAISPVV WRNAEIIAKR ALSGFVMKEV GAATHYHADY
VYPYWAPTLV KLRTVGTHVF YRWTGPSGAQ RAFNGRYSGR ETVSADILMG ADPRTLEAAP
ADVLAQAEAE TKAQAQALGL APTPTGEAAQ IVGADGVVEV LAPIAGDPTA AMRGGRRAPT
REEIARINKV LETPEVAAPA AAPPVATPPP PPPAPPKPKP KSRAVEPLPW SF