Gene Caul_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4239 
Symbol 
ID5901700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4606453 
End bp4609137 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content70% 
IMG OID641564759 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_001685859 
Protein GI167648196 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGCCG AGGAACCCAA ACGCCCGGAT CCCGAGGCGC TCCTGGCCGC CGCCAACAAG 
GCGGGCCGGG GGCGCCTCAA GGTGTTCCTG GGCATGGCCC CGGGGGTGGG CAAGACCTAC
GAGATGCTGC GCGCCGCCCG GCGTCGCAAG GCCGAAGGCC AAGACGTGCT GATCGGCCTG
GTCGAGACCC ACGGCCGCCG CGAGACCGAG AGCCTGCTGC GCGGCATGGA GGTGATGCCC
AGGCGTCCGT TGGAGCACAA GGGCCGGACG CATCTGGAGT TCGACATCGA CGCGGCTCTG
GCCCGCAAGC CCAAGCTGCT GCTGGTCGAC GAGTACGCCC ATTCCAACGC GCCGGGCTCG
CGCCATCCCA AGCGCTGGCA GGACGTCGAG GAACTGCTGG CGGCCGGCAT CGACATCTGG
ACGACCCTGA ACGTCCAGCA CCTGGAAAGT CTGGTCGACG TCGTCCAGCG CATCACCGGC
GTGCGCCAGC GCGAGACGGT GCCCGACAGC GCCCTGTCGC GGGCAGACGA CATCGAAGTC
GTCGACATTA CCCCCGACGA ACTTCGCGAG CGAATGGGGG CGGGTAAGGT CTATGTGCCC
GAGACCGCGC GGCTGGCCTC GGAGAACTTC TTCAAGGTCG AGAACCTCAC GGCCCTGCGC
GAACTGGCCC TGCGCCGCGC GGCCCAGACG GTGGATGATC AGTTGGTCGC CGCCATGCGC
GAGAAGGGCG TCGAGGGCCC CTGGGCGGCA GGCGAGCGGA TCCTGGTCCT GGTCGGCGGC
GACGCCATGT CCAGTTCGCT GGTCCGGGCC GGCCGGCGCC TGTCGGACAT GATGATGGAC
GCACCCTGGA CCGTCACCCA TGTCGAGCGC AGCGATCGCT CGGGTCCCTC GCCCTTGGCG
GCCACGCGGC TGCGCGACGC CCTGAAATTG GCCGAGCAAC TGGGCGGCAC GACCGTGGTC
ATGACCGGCG TCGACATCGT GGCCACGGTG ATGGCTTATG CCCGCCGCAA CAATGTCACC
CAAATCGTCA TCGGCAAGTC GGCCGGCAAC CGCTGGAACG AGCTCACCGG CCGATCCCTG
GCCGCCGCCC TGCTGCGTGA AGCCAGGGGC GAGGCCATCC ACGTCGTCAC CGAGGCGGCC
CACACGCACG GTGACGTCCC GGTCGAGCGC TCGCGCAAGC GTGGACCCGG CTGGCCCGCC
TACGTCACCG GCGCCGCCTT CGTGGGCCTG GCCACCCTGG TCGCCTGGGG CCTGGACACG
GCCTTCGATC GCGTCGACCT GGGCATGATC TACCTGGCGG CGGTGTTAGC CGCCGGCGTC
ATGTACGGCC TGCGACCGGC CCTGGCCGCC GCCACGGCGG CCTTTCTCGT CTACAACTAC
CTGTTCCTGG CCCCGCGCTA CAGCCTGCAG ATCGGGTCGC CGACCGACTT CCTGACCCTG
ATCGTCTTCT GGGCCGTGGC CCTGGCGACC GGCGGCCTGG CCGGGCGCGT GCGCGACCAG
GCGCGGGGCT CGCAGCGGCG GGCGGCCGCC GTTTCCACTT TGCTGGCCGC GGCGCGAACC
CTGTCTGGCG CTACGGGGCG ACAGTTGGTC GCCCAGGCGA TCGCCGACCA GGTCGCGGCG
ACCGCTGGCG CCAAGGCCGT GGTGTTCATC CCCTTGAACG GCGATCTTAC CCCGGCAGCC
GGGGCGCCCT CACTCGAACC GCTGGGCGCC GCGCCCATGG CCGCCGCGCG TTGGGCCTGG
GAGCGCGGTG AAACCGCCGG TTTTGGCACG GCGACCCTGC CGCACGCCGA ATGGACCTTT
TGGCCGCTGG AGGGCGTGCG GGGCCGCGCC GGGGTCGCTG GCGTGGAGGC CGGGGCCATG
GCCCAGGGAT CGGATGACGA GCGCCTTGTG TTGGGTCTTC TTGATCAGGG CGCCATCGCG
CTAGAACGCG CCGATCTGGC GGCTGATGCT GTCGAGGCCG AAACCCTGCG CCGCGCCGAC
CGCTTTCGTT CAGCCCTGCT CAATTCGATC AGCCACGACC TGCGCACGCC GCTGTCAACC
GTGCTGGGCG CCTCCAGCAC CCTGACTGAG TATGGCGACA AGATGGAGCC GGCCGTTCGC
GCCGACCTGA TGGTCAGCAT TCGCGAGGAG GCCGAGCGCC TCAACCGCTA TGTCGCCAAC
CTGCTGGACA TGACCCGCCT GGAGGGCGGG GCGCTTCGCC TGCGCAACGA CTGGATCGAT
GTGCGCGACG TGCTGGGCGC GGCGGCCGAT CGCGTCACCC GGCGCTTGGG TGGCCGGCCG
CTGACCCGGG ACTTTCCCTC TGAGCTCAGC CTCGTGCGGG CCGACGCCAG TTTGCTGGAG
CAAGTGGTGG TCAACATCCT GGAGAACGCC ATCGCCTACA GCCCACCCGG GGCCCAGATC
GAGATGGCGG CCTATGAGGA CCGCGGCAAC ATCGTGATCA GCATCGAAGA CGAGGGACGG
GGCATCCCGC CTGCGGAGCT GGAACGCGTG TTCGAGAAAT TCCGGCGCAT GGAGGAACCG
ACCGATCGCA CCGGAGGCGT CGGCCTGGGA CTGTCGATCG CCAAGGGCTT CATCGACGCC
ATGAATGGTC GCATCGCCGC GGCCAGTCCT ATCCACGACG GCAAGGGCAC GCGCATTCTG
ATCAGCCTGC CCAAGGCGGT CCATACCCCC AAGGATCTTC TGTGA
 
Protein sequence
MPAEEPKRPD PEALLAAANK AGRGRLKVFL GMAPGVGKTY EMLRAARRRK AEGQDVLIGL 
VETHGRRETE SLLRGMEVMP RRPLEHKGRT HLEFDIDAAL ARKPKLLLVD EYAHSNAPGS
RHPKRWQDVE ELLAAGIDIW TTLNVQHLES LVDVVQRITG VRQRETVPDS ALSRADDIEV
VDITPDELRE RMGAGKVYVP ETARLASENF FKVENLTALR ELALRRAAQT VDDQLVAAMR
EKGVEGPWAA GERILVLVGG DAMSSSLVRA GRRLSDMMMD APWTVTHVER SDRSGPSPLA
ATRLRDALKL AEQLGGTTVV MTGVDIVATV MAYARRNNVT QIVIGKSAGN RWNELTGRSL
AAALLREARG EAIHVVTEAA HTHGDVPVER SRKRGPGWPA YVTGAAFVGL ATLVAWGLDT
AFDRVDLGMI YLAAVLAAGV MYGLRPALAA ATAAFLVYNY LFLAPRYSLQ IGSPTDFLTL
IVFWAVALAT GGLAGRVRDQ ARGSQRRAAA VSTLLAAART LSGATGRQLV AQAIADQVAA
TAGAKAVVFI PLNGDLTPAA GAPSLEPLGA APMAAARWAW ERGETAGFGT ATLPHAEWTF
WPLEGVRGRA GVAGVEAGAM AQGSDDERLV LGLLDQGAIA LERADLAADA VEAETLRRAD
RFRSALLNSI SHDLRTPLST VLGASSTLTE YGDKMEPAVR ADLMVSIREE AERLNRYVAN
LLDMTRLEGG ALRLRNDWID VRDVLGAAAD RVTRRLGGRP LTRDFPSELS LVRADASLLE
QVVVNILENA IAYSPPGAQI EMAAYEDRGN IVISIEDEGR GIPPAELERV FEKFRRMEEP
TDRTGGVGLG LSIAKGFIDA MNGRIAAASP IHDGKGTRIL ISLPKAVHTP KDLL