| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4026 |
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| Symbol | |
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| ID | 5901488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4362023 |
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| End bp | 4365172 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641564547 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001685649 |
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| Protein GI | 167647986 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.40035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.354384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCC GTTTCTTCAT CGACCGGCCG ATCTTCGCGT GGGTCGTCGC GATCGTCATC
ATGCTGGCGG GGGTCCTGGC CATCCGCACC CTGCCGATCG CCCAATATCC GAACATCGCC
CTGCCCCAGG TCTCGGTCAA CGCCATCTAT CCCGGCGCCT CGGCCAAGAC CGTCGAGGAC
AGCGTCACCC AGGTCATCGA GCAGAAGATG AAGGGCCTGG ACGGCCTGGA CTACATGTCG
TCGACCAGCG ACAGCTCGGG CTCGGCCACC ACCACCCTGA CCTTCAAGGC CGGCACCAAC
ATCGATATCG CCCAGGTGCA GGTGCAGAAC AAGCTGCAGA CGGCCACCGC CCTGCTGCCG
CAGGAAGTGC AGCAGCAGGG CCTGACCGTG GCCAAGTCGG CGCGCAACTT CCTGCTGATC
GTCGGGATGT ATTCGGAGGA TCCGAAGACC ACCAACACCG ACCTGGCCGA CTACATCGCC
AGCAATCTGC AAGACCCCCT GAGCCGCGTC GACGGCGTGG GCGAGGTCCA GCTGTTCGGC
GCGCAATACG CCATGCGCGT CTGGCTGGAC CCTACCAAGC TGGCCAGCTA CAGCCTGACC
CCCGCCGACG TGATCGCCGC GATCAAGGCC CAGAACGCCC AGGTCTCGGC CGGCCAGCTG
GGCGGCACGC CCAATCTGCC GGGCATTGGC CTGAACGCCA CGATCACGGC CCAGTCACGC
CTGAGCACCC CGGCCGAGTT CCAGAACATC ATCGTCAAGA ACAGCGCCGG CGGCGCCATC
GTGCATCTGC GCGACGTCGC CCGCGTGGAA CTGGGCGCGG AAAGCTACGG CTTCGGCGCC
AAGTACAATG GCAAGCCCGC CGCGGGCCTG GCCATCCGCC TGGCTCCCGG CGCCAACGCC
CTGGACACCG CCGACGCCAT CAAGGCGCGG ATGTCCCAGC TGGAAAAGAA CTTCCCGGCC
AACTTCAAGT ACGTGATCCC GTACGACTCC ACCCCGTTCG TGAGGCTGTC GATCGAGGAA
GTCGTCAAGA CCCTGATCGA GGCCATCGTC CTGGTCTTCA TCGTCATGTT CCTGTTCCTG
CAGAACTGGC GCGCGACCCT GATCCCGACC ATCGCCGTGC CGGTCGTCCT GCTGGGCACC
TTCGGCGTGC TGGCGGCCTT CGGCTACTCG ATCAACACCC TGACCATGTT CGGCCTGGTG
CTGGCCATCG GCCTGCTGGT CGATGACGCC ATCGTCGTGG TCGAGAACGT CGAGCGGGTG
ATGAGCGAGG AAGGGCTGTC GCCCATCGAG GCCACGCGCA AGTCGATGAA CGAGATCACC
GGCGCCCTGA TCGGCATCGC CCTGGTCCTG GCCGCGGTGT TCGTGCCCAT GGCCTTCTTC
GGCGGCTCGC AGGGCGTGAT CTATCGCCAG TTCTCGATCA CCATCGTCTC GGCCATGGCC
CTGTCGGTGC TGGTCGCCCT GATCCTGACG CCGGCCCTGT GCGCCACCCT GCTCAAGCCG
GTCGCCAAGG GTCACACCAT CGCCGACAAG GGCTTCTTCG GCTGGTTCAA CCGCAACTTC
AACGACGTCA GCCATCGCTA CCAGGGCACG GTTCGCGGCC TGCTGGGCAA GAGCGGCCGC
TGGCTGGTCG CCTATGGCGT GATCATCCTG CTCGTGGGCT TCCTGTTCAT CCGCCTGCCC
AGCGCCTTCC TGCCCGAGGA AGACCAGGGC ACGATGTACG CCCTCGTCCA ACTGCCGCCC
GGCGCGCCGG AAGAACGCAC CCAGGCCGTG CTCGACACCG TGCGATCACA CTTCCTGGTC
GATGAGAAGG ACTCCGTTCA GGCGGTCTTC ACCGTCGCCG GCTTCAGCTT CGCCGGCGCG
GGTCAGAACG CCGGCCTGGC CTTCATCCGC CTGAAGGACT TCGACCAACG CAAGGCCGCC
AATCTCAAGG CTCCGGCCAT CGCCGGCCGG GCCATGGGCA AGTTCATGCA GATCCGCGAC
GCCATGGTCT TCGCCATCGT GCCGCCGGCC GTGCCGGAAC TGGGCACCTC GTCGGGCTTC
GACTTCCAAT TGCAGGACGT CGGCGGCGTG GGTCACGAGG CCCTGGTCGC CGCCCGCAAC
CAGGTGCTGG GCATGGCCGC CCAGGACCCG ACCCTGGTCG GCGTACGTCC CAACGGCCAG
GACGACACGC CGCAGCTGAA GATCGACATC GACCAGGCCA AGGCCGGGGC GATGGGCCTG
ACCACCGCCG ACATCAACGC CGCGCTCAGC GCCGCGTGGG GCGGTTCCTA CGTCAACGAC
TTCATCGATC GCGGCCGGGT CAAGAAGGTC TATGTCCAGG CCGACGCGCC CTACCGCATG
CGTCCGGAAG ACCTGAACAC CTGGTACGTC CGCACCAGCG CCGGCACCAT GGCCCCGTTC
TCGTCCTTCG CCACCACCCA CTGGATCTAC GGCTCGCCGC GTCTCGAGCG CTACAACGGC
CTTTCCTCGC TCAACATCCA GGGCGCGCCC GCCCCGGGCA AGAGCTCGGG CCAGGCCATG
GCCGCCATGG AGAAGATCGC CGCCCAGCTG CCGCCGGGCG TCGGCTTCGA ATGGACCGGC
CTGTCGGCTC AGGAACGCGA GTCCGGCAAC CAGGCCCCGG CCCTGTACGG CATCTCGATC
CTGGTGGTGT TCCTGCTGCT GGCCGCTCTC TATGAAAGCT GGTCGATCCC GCTGTCGGTG
ATCATGGTCA TTCCGCTGGG CATCGTCGGC GCCCTGCTGG CCACCAGCCT GCGCGGCCTG
TCCAACGACA TCTACTTCCA GGTGGGCCTG CTGACGACCA TGGGCCTGGC GTCCAAGAAC
GCCATCCTGA TCGTCGAGTT CGCCAAGGAC CTGCACGAGA AGGGCATGGA CCTGGTCGAG
GCGACGGTGG AGGCGGTGCG CATCCGTCTG CGGCCGATCA TCATGACCTC GCTGGCCTTC
GTGTTCGGCG TGCTGCCCCT TGCCATCTCG AACGGGGCGG GCTCGGGCAG CCAGCACGCC
ATCGGCACCG GCGTGATCGG CGGCATGATC TCGGCCACCC TGCTGGCGAT CTTCTTCGTT
CCGCTGTTCT TCGTGATCGT CGAGCGGATC TTCAAGCCCA AGCCGCGTCA CCGTGACGAG
GCCCCCGCGA CTCCGGCCGA GAGCCACTGA
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| Protein sequence | MLSRFFIDRP IFAWVVAIVI MLAGVLAIRT LPIAQYPNIA LPQVSVNAIY PGASAKTVED
SVTQVIEQKM KGLDGLDYMS STSDSSGSAT TTLTFKAGTN IDIAQVQVQN KLQTATALLP
QEVQQQGLTV AKSARNFLLI VGMYSEDPKT TNTDLADYIA SNLQDPLSRV DGVGEVQLFG
AQYAMRVWLD PTKLASYSLT PADVIAAIKA QNAQVSAGQL GGTPNLPGIG LNATITAQSR
LSTPAEFQNI IVKNSAGGAI VHLRDVARVE LGAESYGFGA KYNGKPAAGL AIRLAPGANA
LDTADAIKAR MSQLEKNFPA NFKYVIPYDS TPFVRLSIEE VVKTLIEAIV LVFIVMFLFL
QNWRATLIPT IAVPVVLLGT FGVLAAFGYS INTLTMFGLV LAIGLLVDDA IVVVENVERV
MSEEGLSPIE ATRKSMNEIT GALIGIALVL AAVFVPMAFF GGSQGVIYRQ FSITIVSAMA
LSVLVALILT PALCATLLKP VAKGHTIADK GFFGWFNRNF NDVSHRYQGT VRGLLGKSGR
WLVAYGVIIL LVGFLFIRLP SAFLPEEDQG TMYALVQLPP GAPEERTQAV LDTVRSHFLV
DEKDSVQAVF TVAGFSFAGA GQNAGLAFIR LKDFDQRKAA NLKAPAIAGR AMGKFMQIRD
AMVFAIVPPA VPELGTSSGF DFQLQDVGGV GHEALVAARN QVLGMAAQDP TLVGVRPNGQ
DDTPQLKIDI DQAKAGAMGL TTADINAALS AAWGGSYVND FIDRGRVKKV YVQADAPYRM
RPEDLNTWYV RTSAGTMAPF SSFATTHWIY GSPRLERYNG LSSLNIQGAP APGKSSGQAM
AAMEKIAAQL PPGVGFEWTG LSAQERESGN QAPALYGISI LVVFLLLAAL YESWSIPLSV
IMVIPLGIVG ALLATSLRGL SNDIYFQVGL LTTMGLASKN AILIVEFAKD LHEKGMDLVE
ATVEAVRIRL RPIIMTSLAF VFGVLPLAIS NGAGSGSQHA IGTGVIGGMI SATLLAIFFV
PLFFVIVERI FKPKPRHRDE APATPAESH
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