Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4025 |
Symbol | |
ID | 5901487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4360859 |
End bp | 4362010 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641564546 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001685648 |
Protein GI | 167647985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.503943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.259915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCA ACCGTTCACG CGCCGCCACC CTGGCGGCCA TCGCCCTCAC CCTGGCCGCC TGCGGCCAAG GCAAGGGCGC AGCCGGAGGC GGCATGGGCC AAGGCGGCCC GACCCCGGTC GGGGTGATCG TCGCCAAGAC CGAGTCGGTG ACCTTGACCT CCGAATTGAC AGGCCGCACC TCGGCCCACC TGGTCTCGGA GGTGCGCCCG CAGGTCAACG GCATCGTCAA GGCCCGCCTG TTCCAGGAAG GCGGCTATGT CCGCGCCGGC CAGCCGCTCT ATCAGATCGA TCCGGCCACC TATCAGGCGG CCTACAACAG CGCGGCCGCC GGTCTGGCCC AGGCTCAGGC CGCCGCCACC GCCGCCAGGC TGAAGGCCGA GCGCTACAAG GGCCTGGTCG AGATCAACGC GGTCTCCAAG CAGGATAACG ACGACGCCCA GGCCGCGGCG CTGCAGGCCG CCGCCAACGT CGCCGCCCAG AAGGCCGCCG TCGACGCCGC CCGCATCAAT CTCGGCTATA CCAAGGTGCT GGCCCCGATC TCCGGCCGCA TCGGCAAGAG CGCGGTGACG CCCGGCGCCC TGGTCACCGC CAGCCAGGCC AACGCTCTGG CCACGGTGCA GGACCTGTCG ACGATCTATG TCGACCTGAC CCAGTCCTCG GCCGACCTGC TCAAGCTGCA GGCGGCGATG AACAGCGGCC AGCTGGGTCG CTCCGGTTCG GCCCAGGTCA CGCTGAAGCT GGAGGACGGC TCGACCTATC CCATTTCGGG TCGGCTGGAG TTCTCGGACG TCACCGTCGA CCCGACCACC GGCTCGGTCG GCCTGCGCGC CACGTTCAAC AATCCCAACG GCGTGCTGCT GCCGGGCATG TACGTCCGCG CCATCCTCGG CAAGGGCGTG GCCAATGGCG GCATGCTGAT CCCGCAGGCG GCGGTCAGCC GCGACCCGAA GGGCGCCGCG ACCGTGATGG TGGTCGGCGC CAAGGGCGCG GCCGAGGTCC GCCAGATCGT CACCACCCAG ACGGTGGGCG ACAAGTGGCT GGTCACGTCG GGCCTGAATC CCGGCGACCA GGTCATCGTC GAGGGCCTGC AGAAGGTCCG CCCCGGCGCC CCGGTGAAGG CCGCCGTCAT CACCGCTCAA GCTCAACGCT AA
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Protein sequence | MSVNRSRAAT LAAIALTLAA CGQGKGAAGG GMGQGGPTPV GVIVAKTESV TLTSELTGRT SAHLVSEVRP QVNGIVKARL FQEGGYVRAG QPLYQIDPAT YQAAYNSAAA GLAQAQAAAT AARLKAERYK GLVEINAVSK QDNDDAQAAA LQAAANVAAQ KAAVDAARIN LGYTKVLAPI SGRIGKSAVT PGALVTASQA NALATVQDLS TIYVDLTQSS ADLLKLQAAM NSGQLGRSGS AQVTLKLEDG STYPISGRLE FSDVTVDPTT GSVGLRATFN NPNGVLLPGM YVRAILGKGV ANGGMLIPQA AVSRDPKGAA TVMVVGAKGA AEVRQIVTTQ TVGDKWLVTS GLNPGDQVIV EGLQKVRPGA PVKAAVITAQ AQR
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