| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3968 |
|---|
| Symbol | |
|---|
| ID | 5901430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4296608 |
|---|
| End bp | 4298188 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641564489 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001685591 |
|---|
| Protein GI | 167647928 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.179224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGC GGTCGCGGGC CTGGGCCAGG ACCTGGTGGC CGGCTCTGCG GCTGCGCACC
ATCCTGCTGA GCGTGCTGCT GTTCGCCGCC GCCATGCCGG CCATCGGGGC GGTGTTCCTG
CGCACCTACG AGAACACCCT GGTGCGCCAG ACCGAGGCCG AGCTGGCCAG CCAGGGCGCG
GCCCTGGCGG CGACGGCCGG CGCCCTGTGG CCCGGAGCCA TCCGCGACAC CACCCCGGCC
GATCCCGACG CCCGCGACGA CCCCGGCTAC TACCGGCCCG AGGCCACCAG CATCGACCTG
CGCGACTCGC CGGTGCTGCC CGAGCGTCCG GCCGCGCCGC CCGGCCCGCC CGCCGATCCC
CAGGCTGAGG CGGCGGCCGA GGTGCTGGAG CCGATCCTCG ACCGGACCAG CCGCAGCACC
CTGGCCTCGA TCCTCATCGT CGACCGTCAC GGCGTGGTGG TGCGCGGCCT GGGGCAGGGC
GGGAGTCTCG CGGCCCTGCC GGAGATCCAG GCGGCGCTGA AGGGCCGGTC GCGCACGGTC
CTGCGCCGCA ATGGCGGCTA TCATCCGCGC TACCGGTTCG AGTGGCTCAG TCGCGCCTCG
GCCGTGCGCC TGCACCATGC CCGGCCGATC ATCGTCAACG GCAAGGTGCA GGGGGCGCTG
CTGCTGTCGC GCTCGCCCCG GGCGCTATTC CGAGGCGTCT ACCAGGACCG GGGCAAGATC
GCGATCGGTG CGGGGGCGAC GATCCTGCTG CTGGTGCTGC TGTCGGGCCT GGTGTCGCGC
GGCGTGACCC GGCCGATCGA GGCCCTGAGC GCGGCGACCC GCGGCGTGGC CAGCGGCCAG
GGGACCGTGC CGGAGACCCC CGTCACCGCC GCCGTCGAGA TCCGCGACCT CTACCAGGAC
TTCCGGGTGA TGGCCGACGC CATCGCCGTG CGCTCGCGCT ACCTGCGCGA CTTCGCCGCC
GCCGTCAGCC ACGAGTTCAA GACCCCGCTG GCCGGGATCA CCGGGGCGGT CGAGCTGCTG
GACGACCATT TCGACACCAT GACCCCGGAC GAGCGCCGGC GGTTCCTGGG CAACATCTCG
GCCGACAGCG CCCGGCTCTC GCACCTGGTG GGCCGGCTGA TGGACCTGGC GCGGGCCGAC
ATGGCCATGC CGCAGGCGGG GGTGACGTCC GAGCTGGCCG CCGCCGCGCG GCGGGTGGCC
GACGCGCAGG GGCGCGACAT CGCCGTGGTG CTGGACCTGC CGGCTGGCCT GCCGCGGGTG
GCCGCGCCCG AGGCGACGGT GGAGACGGTG CTGACGACGC TGGTGGAGAA CAGCCGGCAG
GCGGGCGCGC GGACGGTTCG GATCGTCGCG CGGGTCGTGG GCGAGGAGGT GGTGCTGCGG
GTCAGCGACG ACGGCCCCGG CGTGCCGCCG GCTGACCGCG ACCGCCTGTT CGAGCCGTTC
TTCACCAGCC GGCGGGAGAC GGGCGGCACG GGGCTCGGGC TGTCGATCGC GCGGTCGCTG
CTGGCGGCGA GTTCCGGGCG GGTGGGGTTG GTCGAGGGCG AGGCGGGGGC GGTGTTCGAG
GTGGGGTTGT TGTGGGGGTA G
|
|---|
| Protein sequence | MIERSRAWAR TWWPALRLRT ILLSVLLFAA AMPAIGAVFL RTYENTLVRQ TEAELASQGA
ALAATAGALW PGAIRDTTPA DPDARDDPGY YRPEATSIDL RDSPVLPERP AAPPGPPADP
QAEAAAEVLE PILDRTSRST LASILIVDRH GVVVRGLGQG GSLAALPEIQ AALKGRSRTV
LRRNGGYHPR YRFEWLSRAS AVRLHHARPI IVNGKVQGAL LLSRSPRALF RGVYQDRGKI
AIGAGATILL LVLLSGLVSR GVTRPIEALS AATRGVASGQ GTVPETPVTA AVEIRDLYQD
FRVMADAIAV RSRYLRDFAA AVSHEFKTPL AGITGAVELL DDHFDTMTPD ERRRFLGNIS
ADSARLSHLV GRLMDLARAD MAMPQAGVTS ELAAAARRVA DAQGRDIAVV LDLPAGLPRV
AAPEATVETV LTTLVENSRQ AGARTVRIVA RVVGEEVVLR VSDDGPGVPP ADRDRLFEPF
FTSRRETGGT GLGLSIARSL LAASSGRVGL VEGEAGAVFE VGLLWG
|
|---|
| |