Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3941 |
Symbol | |
ID | 5901403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4264170 |
End bp | 4266548 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641564462 |
Product | TonB-dependent receptor |
Protein accession | YP_001685564 |
Protein GI | 167647901 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.78272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGTCGA CAAAGCGTAC CGGGTTTTCC AAGGCCGGAA CGGCGGTCGC GGGACTGCGC TGGACCACGG CCCTGCTGGC CTCGTCCATG CTGTCCAGCG TGGCGGCCCA CGCCCAGACC ACCGCGCAGA GCGGCGCCGT CGCCCTCGAG GAAGTGGTCG TGACCGCCCA GAAGCGGTCG GAAAACCTGC AGGACGTGCC GATCAGCATC CAGGCCCTGG GGACCCAGAC CCTGGAAGAG CGCCACGTCA GCGGCCTCAA CGACTATGTG AAGTTCCTGC CCAGCGTGTC GATCCAGACC ACCTCGCCGG GCTTTTCCAG CGTGTTCATG CGCGGCGTGG TCAGCGGCGA CAACGCCAAC CACTCGGGTC CGCTGCCCAC CGTCGGCACC TATCTGGACG AGCAGCCGAT CACCACGATC CAAGGCGCGC TCGACGTCCA CATCTACGAC ATCGCCCGGG TCGAGGCGCT GTCGGGGCCG CAGGGCACGC TGTACGGCGC CAGCTCGATG GCCGGCACGG TGCGCATCAT CACCAACAAG CCCAGCACCG CGGGCTTCAA GGCCGGCTAC GACATCGAGG CCAACACCGT CTCGAAGGGC GATCCCGGCT ATGTGGTCGA GGGCTTCGTC AACCAGCCGA TCAACGACAA GGTGGCCGTG CGCCTAGTCG GCTGGGCCGA GCATGACGGC GGCTATATCG ACAACGTGGC GCAGTCGCGC ACCTTCCCGA CCTCGGGCGT GACCCGCAAC AACGCCAGCC AGGTCAAGAA GAACTACAAC GACGTCGACA CCTACGGCGC GCGGGCGGCC CTGCGCCTCG AGCTCGGCGA CAACTGGGTG ATCACCCCCA CCGTCATGGG CCAGCAAGAG AAGGTGCACG GCCTGTTCGC CTTCGACCCC ACCCTCGGCG ACCTGAAGGT GGCGCACTAC TATCCCGAAG GCTCCAACGA CAAATGGGGC CAGGCGGCCC TGACCATCGA GGGCCAGATC AGCAACTTCG ACGTGGTCTA TGCCGGCTCG TACCTGAAGC GCACTGTCGA CAGCACGTCG GACTACAATG ACTATTCGTT CTTCTACGAC ACCCTGACCA CCTACGGGCA GTACTATACC GACAACGCCG GCAACCCGGT GGATCCGTCG CAATACATTC AGGCCCGGGA CGGCTACACC AAGCAGAGCC ACGAGATCCG CATATCGAGC CCGCAGGAGA ACCGCGTCCG CTTCGTCGGC GGCCTGTTCT ACCAGCAGCA GAAGCACGAC ATCTTCCAGA ACTACAAGAT CGACGCCCTG GGGACGACCT ATTCGGTGAC GGGCTATCCC CACACCGTGT GGCTGACCAA GCAGAAGCGC GTCGACGAGG ACCAGGCGGC GTTCGGCGAG GTGGCGTTCG ACATCACCGA CAAGCTGACC CTGACCGGCG GCGTCCGCTT CTTCAGGGCG CACAACAGCC TGAAGGGCTT CTTCGGCTTC GGGATCGATT TCCCGTTCAG CTCCGGCGAG AAGCAGTGCT TCGGCCCGCC GGTCGTCGAC GGTTCGCCCT GTACGAACCT GAACAAGAGC ATCAAGGAGA ACGGCAACTC GCCCAAGGTC AACCTGACCT ACAAGATCGA CTCCGATAAG CTGGTCTACG CCACCTATTC CGAGGGCTTC CGGCCGGGCG GCATCAACCG CCGCGGCACG GTTCCGCCCT ACACCGCCGA CTTCCTCAAG AACTACGAGG CGGGGTGGAA GACCTCCTGG CTCGAGAACC GGGTGCGCTG GAACGGCGCG GCCTATATCG AGGACTGGAA GGACTTCCAG GTCGGCCTGC TGGGCGCCAA CAGCCTGACC GAGGTGCACA ACGCGGGCAG CGCGCGGGTC AAGGGCGTCG AGACCGACAT CAATTGGGCG GTCATGCGAG GTTGGACGGT CTCCGGCTCG GCCGCCTATA CCAGCGCCCA CCTGACGGAG AACTTCTGCC TGGCGCTGGT CAACGGCCAG CAGGTCACCA ACTGTCCCAA TCCCGAGGCG CCCAAGGGCT CGGTCCTGCC GATCACTCCG AAGTTCAAGG CCAACCTGAC CAGCCGCTAC GAATGGGACA TGGGTGAGTA CCGCGCCCAC GTCCAGGCGG CCGGGGTCTA TCAGACCGGC AGCTGGACCG ACCTGCGGAT CATCGAGCGC GGGTGGATCG GCCGGCAGAA GGCCTATGGC GTGCTGGACC TGACCACCGG CGTCGATCGC GACAACTGGA GCCTGGAGCT GTTCGTCAAG AACGCCTTCG ACAAGCGCGC TAGCCTCTAT CGCTACGCCG AGTGCAACGA GTCGATCTGC GCCGCCCAAG TCTATCAGGT GCCCAACCAG CCGCGGTTCA TGGGCGTCAA GTTCGGCCAG AAGTTCTAG
|
Protein sequence | MVSTKRTGFS KAGTAVAGLR WTTALLASSM LSSVAAHAQT TAQSGAVALE EVVVTAQKRS ENLQDVPISI QALGTQTLEE RHVSGLNDYV KFLPSVSIQT TSPGFSSVFM RGVVSGDNAN HSGPLPTVGT YLDEQPITTI QGALDVHIYD IARVEALSGP QGTLYGASSM AGTVRIITNK PSTAGFKAGY DIEANTVSKG DPGYVVEGFV NQPINDKVAV RLVGWAEHDG GYIDNVAQSR TFPTSGVTRN NASQVKKNYN DVDTYGARAA LRLELGDNWV ITPTVMGQQE KVHGLFAFDP TLGDLKVAHY YPEGSNDKWG QAALTIEGQI SNFDVVYAGS YLKRTVDSTS DYNDYSFFYD TLTTYGQYYT DNAGNPVDPS QYIQARDGYT KQSHEIRISS PQENRVRFVG GLFYQQQKHD IFQNYKIDAL GTTYSVTGYP HTVWLTKQKR VDEDQAAFGE VAFDITDKLT LTGGVRFFRA HNSLKGFFGF GIDFPFSSGE KQCFGPPVVD GSPCTNLNKS IKENGNSPKV NLTYKIDSDK LVYATYSEGF RPGGINRRGT VPPYTADFLK NYEAGWKTSW LENRVRWNGA AYIEDWKDFQ VGLLGANSLT EVHNAGSARV KGVETDINWA VMRGWTVSGS AAYTSAHLTE NFCLALVNGQ QVTNCPNPEA PKGSVLPITP KFKANLTSRY EWDMGEYRAH VQAAGVYQTG SWTDLRIIER GWIGRQKAYG VLDLTTGVDR DNWSLELFVK NAFDKRASLY RYAECNESIC AAQVYQVPNQ PRFMGVKFGQ KF
|
| |