Gene Caul_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3680 
Symbol 
ID5901136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3974853 
End bp3975584 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID641564191 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_001685305 
Protein GI167647642 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.86041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.729669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCC CAATTGGATT CGTCGACGCC CCGTCGCCGA ACTTCGACGC CCGCAAGAGC 
GTCCCCGACT GCGTCGTGCT GCACTATACC GGCATGGAGA CCGGCGAGGC GGCCTTGGCG
CGGATGTGCG ACCCGGAGGC CAAGGTCTCG GCCCACTACA TGGTCGAGGA GGACGGCCGG
GTCTTCCGCC TCGTGCCCGA GGAACGCCGC GCCTGGCACG CCGGCGCCGC CTTCTGGAAG
GGCGTCAAGG ACATCAACTC GGCCTCGATC GGCGTCGAGA TCGTCAATCC CGGCCACGAA
TTCGGCTATC GCCCGTTCCC CGACGCCCAG GTCGCGGCGG TGATCAACCT GCTGGCCGAC
ATCCGCTCGC GCTGGACCAT CGACGACGAC CGCATCCTGG GCCATTCCGA CATCGCCCCC
GGTCGCAAGA TCGACCCGGG CGAGCTGTTC CCCTGGAAGC GCCTGGCGCA GGCTGGCCAT
GGCCTGTGGG TCGAACCGCC GCCATCGCCC GGCGCACCGC TAGGGCAGGG CGAGGAGGGC
ACCGGCGTCT TCGCCCTGCA GGCCGGCCTG ACCCGGCTGG GCTACAACTG TCCGCCGTCG
GGCAACTATG ACGAATGGAC CGCGACCGTG GTCGCCGCCT TCCAGCGCCA CTGGCTGCAG
ACCCGTTTCG ACGGCGTCGC CGACGGCGAG ACCCGGGCCA GGCTGGTGGC CCTGCTGCGG
GCCGCGGGCT GA
 
Protein sequence
MTFPIGFVDA PSPNFDARKS VPDCVVLHYT GMETGEAALA RMCDPEAKVS AHYMVEEDGR 
VFRLVPEERR AWHAGAAFWK GVKDINSASI GVEIVNPGHE FGYRPFPDAQ VAAVINLLAD
IRSRWTIDDD RILGHSDIAP GRKIDPGELF PWKRLAQAGH GLWVEPPPSP GAPLGQGEEG
TGVFALQAGL TRLGYNCPPS GNYDEWTATV VAAFQRHWLQ TRFDGVADGE TRARLVALLR
AAG