Gene Caul_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3558 
Symbol 
ID5901013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3842274 
End bp3843641 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content66% 
IMG OID641564066 
Productsodium/hydrogen exchanger 
Protein accessionYP_001685183 
Protein GI167647520 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.790544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGACA TCATTTCCAG CCTGGTCAGC ACCGTGGGCG GCATTCTAGG CCCGCACGGA 
CCCGCCACCG CCTCCGCGGC GCACAGCTAC GCGCCCGCCG ATTTCAGCGT GCACTTCTTC
CTCCAGCTGG CGGCGATCGT GCTGGCCTGT CGCGTTGTCG GCTGGCTGGG CCAGAAGGTG
GGTCAGCCCC AGGTGGTGGG CGAGATGGTC GCCGGCGTGA TCCTGGGTCC GTCCCTTCTG
GGCCTGCTGT TTCCGCATTT CCAGGGCATG CTGTTTCCCA AGGAAACCAA GAACATTCTG
TATGTCGGCG CCCAGCTGGG CGTGGGCCTC TACATGTTCA TGGTCGGCAC CAGCTTCCAG
GCGGGTCACT TCAAGGCCAA GGCCAAGAGC GCCATGAGCG TGTCCTTCGC CGGCATCGCC
GCGCCGTTCG TCATCGCGGC CATCATCACG CCGTTCCTGC TCAAGGTCCC CGGTCTGTTC
GCCCCGAACA TCACGCAGGG CGCCGCCACC CTGTTCATGG GCGCGTGCAT CGCCCTGACC
GCCTTCCCGA TGCTGGCTCG GATCATCAAT GAGCGCGGCC TGGCGAAAAC CTCGCTGGGC
ACGCTGTCGC TGACCGCCGG CGCCTTCGAC GACGCTGTTT CGTGGTGCGT GCTGGCCGTG
GTTCTGGCGA CTTTCGGCGG CGGCCCGGGC GTGGCCGTTC TCGCCATCGG CGGCGGCCTG
GCCTGGGTCG CGTTCGTGAC GATCCTCGGC CCCAAGATCC TGGCTCCGCT GGGCCGCAGG
GTCGAGCGCG AGGGCCAGAT GAGCACCGGG GTGCTGGCCA TCATCATGCT GGCCTTCTGC
GTCTCGGCCT TCCTGATGGA CGCCGTCGGC ATCCACGCCA TCTTCGGCGG CTTCATCCTG
GGCGTGGTCA TGCCGCGCGG CAAGCTGGTC GAAGAACTGA AGAAGAAGGT CGAACCGCTC
GCCGTCGTCC TGCTGCTGCC GATGTTCTTC ACCTATTCGG GGCTCAACAC CCGGATGGAC
ATGGTCAACT CGCCGCAACT TCTCTTGATC GCGTTCGGCG TCCTGATCGC CTCGATCCTG
GCCAAGGGCG TGGCCTGCTA CGCCGCCGCC CGCCTGTCGG GCGAAGACAA CCGCACGGCC
CTGGGCATCG GCGCCCTGAT GAACTCGCGC GGCCTGATGG AGCTGATCAT CATCAATATC
GGCCTGCAGA AGGGCATCAT CGGCCCGGCT CTGTTCTCGA TGCTGGTGCT GATGGCCATC
GTCACCACCG TCATGGCCAG CCCGCTGTTC GAGGTCGTCT ACGGCAAGAA GGCCCGTGAA
TCCGGCGAAC TGGACGCCAT CGACGGCGCC GTCGCCAAGG CCGCCTAG
 
Protein sequence
MSDIISSLVS TVGGILGPHG PATASAAHSY APADFSVHFF LQLAAIVLAC RVVGWLGQKV 
GQPQVVGEMV AGVILGPSLL GLLFPHFQGM LFPKETKNIL YVGAQLGVGL YMFMVGTSFQ
AGHFKAKAKS AMSVSFAGIA APFVIAAIIT PFLLKVPGLF APNITQGAAT LFMGACIALT
AFPMLARIIN ERGLAKTSLG TLSLTAGAFD DAVSWCVLAV VLATFGGGPG VAVLAIGGGL
AWVAFVTILG PKILAPLGRR VEREGQMSTG VLAIIMLAFC VSAFLMDAVG IHAIFGGFIL
GVVMPRGKLV EELKKKVEPL AVVLLLPMFF TYSGLNTRMD MVNSPQLLLI AFGVLIASIL
AKGVACYAAA RLSGEDNRTA LGIGALMNSR GLMELIIINI GLQKGIIGPA LFSMLVLMAI
VTTVMASPLF EVVYGKKARE SGELDAIDGA VAKAA