Gene Caul_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3220 
Symbol 
ID5900675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3481125 
End bp3481835 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID641563725 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001684845 
Protein GI167647182 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.418281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.367828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTATC TGCGTTCATT CCTGTTCCAG CTGTTCTTCT GGCTGTGGTC GGTGGCCTGG 
GCCATCGGCA TGGCGCTCAC CCTGCCTCTG CCCCGCCGGT TCAACACCTG GTCTCTGGCG
GCCTGGGCCA AGGGCCTGAT CTGGGGCCTG CGCTGGCTGG CCGGCGTCAA GGTCGAGGTG
CGCGGCGAGG AGTTTAGGCC CACCGGACCG GCGATCATCG CCGCCAAGCA CCAGTCGATG
TTCGACGTCT TCAGCCAGTT CGCCCTGCTG CCCGACGCCT GCTTCGTGAT GAAGAAGGAG
CTCTTGATGG TGCCGCTGTT CGGCTGGCAC GGTCAGAAGG CCGGGATGAT CGTCGTCGAC
CGCGCGGGGC ATTCGACCGC GCTGAAGAAG CTGGTCCGCG ACGCGGTCTC GCGCATGAAG
GAAACCCGCC AGGTGGTGAT CTTCCCGGAG GGCACACGCG GGGCGGTCGG GGTTCCCGGC
GACTACAAGC CCGGCATCGC GGCCCTCTAC CGCGAGCTCG ACTTGCCGGT CACGCCGATG
GCCCTGAACT GCGGCGTCCA CTGGCCCAAG GGCCTGCTGC GCCCGCCCGG CACGATCGTC
TTCGAATACC TGCCGCCCAT CCCCGCCGGC CTCAAGCGCG GCGAGTTCAT GCGCGAACTG
CAGACGCGGA TCGATACGGC GACCAAGGCG CTGGAGGACG AGGGACTTTA G
 
Protein sequence
MIYLRSFLFQ LFFWLWSVAW AIGMALTLPL PRRFNTWSLA AWAKGLIWGL RWLAGVKVEV 
RGEEFRPTGP AIIAAKHQSM FDVFSQFALL PDACFVMKKE LLMVPLFGWH GQKAGMIVVD
RAGHSTALKK LVRDAVSRMK ETRQVVIFPE GTRGAVGVPG DYKPGIAALY RELDLPVTPM
ALNCGVHWPK GLLRPPGTIV FEYLPPIPAG LKRGEFMREL QTRIDTATKA LEDEGL