| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3063 |
|---|
| Symbol | |
|---|
| ID | 5900518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3324549 |
|---|
| End bp | 3325319 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641563565 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001684688 |
|---|
| Protein GI | 167647025 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA ACCTGTTTTC CCTGAAGGGC CGCGTGGCCC TGGTCACCGG CGGTTCGCGC
GGCATCGGCA AGATGATCGC CGAGGGCTTC CTGACCTACG GCGCCCGCCG CGTCTACGTC
TCGGCCCGCA AGGCCGCCGC TTGTGATGCC GCGGCCGAAG AGCTGTCGGC GATCGGCGAA
TGCATCTCGC TGCCGGCCGA CGTCTCGACG ATGGAAGGCA TCCAGGGTCT GGTGGCGCGG
ATCGCCGAGC GCGAGGACAA GCTGGACATC CTGGTCAACA ATGCCGGCGC GGCCTGGGGC
GCGCCCTTCG ACGAGTTTCC CGAGAGCGGC TGGGACAAGG TCGTGGACCT GAACATGAAG
ACCCCGTTCT TCCTGACCCA GGCCCTGATC GGCCACCTGC GGGCGGCCGG CAAGGATCAC
GTGGCCAAGG TGATCAACAT CGCCTCGATC GACGGCCAGT CGGTGACCCA CGACGAAACC
TATCCCTATG GCGCGTCCAA GGCCGGCCTG CTGCACATGA CCAAGCGCAT GGCCCTGCGT
CTGGCGGGCG ACAACATCGC CGTCAGCTGC ATCGCGCCGG GGGCCTTTGC TTCGGACATG
AACAAGGTGG CCCGCGACCA TTCGGATGCG GTGTCCAAGA GCATTCCGGC GGGCCGGATC
GGCACGACCG AGGACATGGC CGGCGCGGCG ATCTACCTGG CCTCGCGGGC CGGGGACTAT
GTGATGGGCT CGGCCGTCAC GGTGGACGGC GGGGTCAGCT TCGCGCGCTG A
|
|---|
| Protein sequence | MMQNLFSLKG RVALVTGGSR GIGKMIAEGF LTYGARRVYV SARKAAACDA AAEELSAIGE
CISLPADVST MEGIQGLVAR IAEREDKLDI LVNNAGAAWG APFDEFPESG WDKVVDLNMK
TPFFLTQALI GHLRAAGKDH VAKVINIASI DGQSVTHDET YPYGASKAGL LHMTKRMALR
LAGDNIAVSC IAPGAFASDM NKVARDHSDA VSKSIPAGRI GTTEDMAGAA IYLASRAGDY
VMGSAVTVDG GVSFAR
|
|---|
| |