Gene Caul_3045 details

Gene Information

• Locus tag: Caul_3045
• Symbol: ribH
• ID: 5900500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Caulobacter sp. K31
• Kingdom: Bacteria
• Replicon accession: NC_010338
• Strand: -
• Start bp: 3309185
• End bp: 3309646
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641563547
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_001684670
• Protein GI: 167647007
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.28571
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGAAGACA AGATTCGCCT GCTGATCGTG GAAGCCCGGC GCTATTCGGG GCTTTCCGAC 
GCGTTGCTGC AAGGCGCGGC GCAGGCGATC GACGCCCAGG GCGCCGAGTA CGACGTGATC 
ACCGTGTCCG AGGCGATGCA ACTGCCGACC GCCATCGCCA TGGCCGAAGA GGCGGGCAAC 
CGTCCCGTCG GCGTGCGCTA TGACGGTTTC GTGGCGCTGG GCGTCATCAT CCGCGGCGAG 
ACCTATCATT CCGAGATCAT GGCCAACGAG ACCGCCCGGG GCTTGAACGA CCTGTCGTTC 
GGCAAGCGGC TGGCGATCGG CTACGGCATC GTCACCGTCG ACGAGGAAGA CCAGGCCTGG 
AGCCGGACCC GGGTTTCCGA GGGCGACCGG GGCGGCAAGG CTGCGCAAGA GTGTCTGGAG 
ATCGTGGGCT TGAAGCGTCA ACTGCTGGGG CAAGCGCGAT GA 

 

Protein sequence

MEDKIRLLIV EARRYSGLSD ALLQGAAQAI DAQGAEYDVI TVSEAMQLPT AIAMAEEAGN 
RPVGVRYDGF VALGVIIRGE TYHSEIMANE TARGLNDLSF GKRLAIGYGI VTVDEEDQAW 
SRTRVSEGDR GGKAAQECLE IVGLKRQLLG QAR