Gene Caul_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2948 
Symbol 
ID5900403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3198848 
End bp3200098 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content67% 
IMG OID641563445 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001684573 
Protein GI167646910 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0471344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGTT TCCTCAATCT CGACGGACTC GCCCTCAGCA CCGCCCAAGG CAAGTGGAAG 
CGCACGGCCG ACGCCCTGGC GCGCGACGTG CTCAGGCCCA ACGCCGAGGC GGTGGATCGC
GAGGGCAAGT TCCCCAAGGC CAACATGCGG GCCCTGGGCG AGGCGGGATT GCTGGGCCTG
CAGATCCCCA CCGAACAGGG CGGGGCCGGC GAAGGCATCG TCACCGCCGT GCTGGTCACC
GAGGCCCTGG CCAAGGGCTG CGCCACCACG GCCATGGCCT ATCACATGCA CCAGAGCAGC
ATTCCCTTCC TCAGCGCCGC GGCCACGCCC GAGCAGGTGG AACAGCTGCT GGGTCCGGTG
GTGCGCGGCG AGTGGTTCGG CGCCTTCGCG ATGAGCGAGC CCGGATCGGG CAACAAGATC
TGGCACATGG ACAGCTTCGC CCAACGCAAT GGCGCGGGCT ATGTCATCGA CTCGTTCAAG
TCGTTCTGCA CCAGCGCCGG CGAGGCCGAT TTCTACCTGG TGCCGGTGCG CTCGTTCGCC
GGCGCCGGAC CGCACGACCT GAGCCTGTTC ATGATCATGG GGGACGATCC GAACATCAAG
CCGATCGGCG TCTGGGACGG CATGGGCCTG CGCGGCAATT CCAGCCGCCC GATCCATTTC
GACGGCTGCC ACGTGCCGGA CATCCAGCGC TTCGGCGAGG AGAAGGAGGG CTTCTCCTAC
ATGATGGCCT ATTCGCTGCC GATCTATCTG TGCGGCATGG CCGCCTGCTA TGTCGGCATC
GCCCTGGCCG CCTACGAGGC CGCGGTCGCC CACGTGAAGG CGCGGATCCA CACCGACACC
AACAAGTCCC TGGCCCACCT GGAGACCGTG CAGCGGCTGG TGGCCGAGAT GCGGGTGGCC
ATCGACTGCG TGCGCTTCAC CACCCTGCGC ATCGCCCAGC AGGCCGACAA CGCCGTGGTG
CTGTTCAACG AGTTCGCCCA GACCGGCCTG CTGGACGAGA TCATCCGCGA CAACCCTGAC
GACCCGTTCT TCATCGAGGT GGCCGCCCTG AAGCCGGCGG CCTGCGAGAT GGCCATCCAG
GTGACCAACA AGGCCCTGCA GGTGTGCGGC GGCGCCGGCT ACAAGCGCGG CCATCCGGTC
GAGCGCGGCT ATCGCGACGG CCGCGCCGGC TCGGTGATGG GTCCCTCGGA CGACACCGTC
AAACTGGTCA TCGGCACCCA GATCCTCGGC CTCAGCCAAC CCTGGACATA A
 
Protein sequence
MPGFLNLDGL ALSTAQGKWK RTADALARDV LRPNAEAVDR EGKFPKANMR ALGEAGLLGL 
QIPTEQGGAG EGIVTAVLVT EALAKGCATT AMAYHMHQSS IPFLSAAATP EQVEQLLGPV
VRGEWFGAFA MSEPGSGNKI WHMDSFAQRN GAGYVIDSFK SFCTSAGEAD FYLVPVRSFA
GAGPHDLSLF MIMGDDPNIK PIGVWDGMGL RGNSSRPIHF DGCHVPDIQR FGEEKEGFSY
MMAYSLPIYL CGMAACYVGI ALAAYEAAVA HVKARIHTDT NKSLAHLETV QRLVAEMRVA
IDCVRFTTLR IAQQADNAVV LFNEFAQTGL LDEIIRDNPD DPFFIEVAAL KPAACEMAIQ
VTNKALQVCG GAGYKRGHPV ERGYRDGRAG SVMGPSDDTV KLVIGTQILG LSQPWT