Gene Caul_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2929 
Symbol 
ID5900384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3174754 
End bp3176526 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content73% 
IMG OID641563426 
Productpeptidase M56 BlaR1 
Protein accessionYP_001684554 
Protein GI167646891 
COG category[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0666] FOG: Ankyrin repeat
[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG ACCTGCTGTC CCTGCTGGTC CGCGCCAATC TGGCGCTGGG CGCGGCCGTG 
CTGCTGGCGC TGATCCTGCG TCGGCCCGTG AGGAACCTGT TCGGAGCTCG CGCCGCCTAC
GCCCTATGGC TGGTCGCGCC GCTGGCCGTG CTGGCCGTCC TGCTGCCAGC TCGGACCGTC
CAGATCCAGA ACCCTGCTTC CCCGTCGCCA GTGGTCCAGG CCCAGGCCGA ACCGATGGCC
CAGGTCTCCG TTCCGGCGAC CGTCGCCTCC CAGGCCGCGA CGCGACCGAC CGCCCAGCCC
TTCCCGCTTC ATGCCGCCCT GCTGGCCGTC TGGGTCCTGG TCGCCCTGTC GGCGATCGGC
GTCCAGGCCG AGCGCCAGCG CCGGTTCGTC AAGTCGCTGG GCCGGCTGCG CGGCGAGGCC
GACCTGTTCC ACGCCGAACG CCCGGGAGTC GGCCCCGCCG TCATCGGCGC CCTGGCGCCG
AAGCTGGTGC TGCCCGCCGA CTTCGCGGTG CGGTTCACCC TCGAGGAACA GGCCCTGATC
CTGGCCCACG AGCGCAGCCA CCTGGCGGCC GGCGACGCCC AGGTCAACGC CCTGGCCACC
GCCCTGCAGT GCGTCTTCTG GTTCAATCCC CTGGTTCATC TCGGCGCCAA CCGCCTGCGG
ATCGACCAGG AGATCGCCTG CGACGCCGCG GTGCTGACCC GCTTCCCCGT CGCCCGCCGC
GCCTATGGCG AGGCGATGCT GAAGACCCAA CTGGCGCCGT TCGCGCCGCC GCTCGGTTGC
CATTGGCCAG CCTCGGCCAA CAAGCAACTC AAGGAGAGGT TCGTCATGCT GAAGGAACAC
CGCCAGGGCC GCGCCCGCCG CCTGGCCGGC GGCGGCGCCG TCGCCGCCCT GGGCCTGGCC
GCTGGCTTCG CCGTCTGGGC CGCCCAGCCG GCCCGCGTCA TTCAGACCCA TCCCGGAGTG
ACCCGCCACG ACGCCGCTCG CGACCTGGCC AGCCCCCTGT ACAAGGCCGT GCAGGACGGC
GACGCGGCCA AGGCGCGCCA GTTGATCGCC GCCGGGGCCG AGGTCGACTT CAAGGCCTAT
GGCGACGGCA CGCCGCTGAT CGCGGCGGCC CGCGGAGGCC GGGCCGACCT GGTCGACCTG
CTGCTGGCCA ACGGCGCCGA TCCCAATCTC GCCATGCGCG GCGACGGCGC GCCCCTGATC
GCCGCCGCCG ACCTCGGCCG GGCCGACATC GCCAAGGCCC TGGTCGAACG CGGCGCGGCG
CTCGACATCG AGGTTCCCGG CGACGGCACG CCGCTGATCA GCGCCATCCG CTCGGGCGAC
CTGGCCACCG TGCGCTATCT GGTCGACAAG GGCGCCGACA TGAACCGCGC CGCCCCCAGC
GACGGCACGC CCCTGATCGA GGCGGCCCGT TCGGGCCGGC TGGAGCTGGT CGACCTGCTG
CTAGCCAAGG GGGCGGACGC CGGCCAGGCC CTGCGCGGTG AAGGCGATCC GCTGATCGCG
GCGGCCGGCG GCGGACACCT CGACATCGTC CGGACCCTGG TCGAGCACGG TGCCTCGGTG
GAGTCCTTCG TGCCGGGCGA CGAGACCCCG CTGATCAACG CCGCCCAGTC CGGCGACCTG
GCGACCGTCG CCTATCTGAT CGACAGGGGC GCCGACGTGA ACCGCGCCGT CCCCGCCAAT
CGCGGCGAGA CGCGCTCGCC GCTGAGCGAA GCGGTCAAGC ACGGCCACAC CGACGTCGTG
AACTACCTCA AGGCCAAGGG CGCGCGCGCC TAG
 
Protein sequence
MAADLLSLLV RANLALGAAV LLALILRRPV RNLFGARAAY ALWLVAPLAV LAVLLPARTV 
QIQNPASPSP VVQAQAEPMA QVSVPATVAS QAATRPTAQP FPLHAALLAV WVLVALSAIG
VQAERQRRFV KSLGRLRGEA DLFHAERPGV GPAVIGALAP KLVLPADFAV RFTLEEQALI
LAHERSHLAA GDAQVNALAT ALQCVFWFNP LVHLGANRLR IDQEIACDAA VLTRFPVARR
AYGEAMLKTQ LAPFAPPLGC HWPASANKQL KERFVMLKEH RQGRARRLAG GGAVAALGLA
AGFAVWAAQP ARVIQTHPGV TRHDAARDLA SPLYKAVQDG DAAKARQLIA AGAEVDFKAY
GDGTPLIAAA RGGRADLVDL LLANGADPNL AMRGDGAPLI AAADLGRADI AKALVERGAA
LDIEVPGDGT PLISAIRSGD LATVRYLVDK GADMNRAAPS DGTPLIEAAR SGRLELVDLL
LAKGADAGQA LRGEGDPLIA AAGGGHLDIV RTLVEHGASV ESFVPGDETP LINAAQSGDL
ATVAYLIDRG ADVNRAVPAN RGETRSPLSE AVKHGHTDVV NYLKAKGARA