Gene Caul_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2909 
Symbol 
ID5900364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3154287 
End bp3154943 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID641563406 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001684534 
Protein GI167646871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0545261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG CCCTCGACCT GATCGTCCAA TCCGCCCCGC TCCTCCTGAA AGGCGCGGGC 
TATACCGTGC TGCTCAGCCT GATCGGCATG GGCGTCGGGC TGGTCATAGG TTTTGGCCTG
GCCTTGATGC GGCTGTCGCG CAGCCCGCTG CTGCGCTGGC CGGCGGCCAT CTACGTCTCG
GCGATCCGGG GCACGCCGCT GCTGGTGCAG CTGTTCCTGA TCTATTACGG CCTGCCGCAG
TTGGGCGTTC AGCTGCCGCC GCTGCTGGCG GCCGGGATCG GCTTCTCGAT CAATATCGGC
GCCTATGCCG GCGAGATCCT GCGCAGCGCC ATCGCCGCCG TCGACAAGGG TCAGTGGGAG
GCCGCCAGCG TGCTGGGCAT GAGCCGCGGT CAGGCTCTGC GCCGGGTGAT CCTGCCCCAG
GCCGCCCGCA CCGCCGTCGC GCCCCTGTCC AACAGCTTCA TCAGCCTGGT CAAGGACACC
TCCCTGGCCG CCACCATCCA GGTGCCCGAA CTGTTCCGCC AGGCCCAGCT GATCACCGCC
CGCACCTACG AGATCTTCGC CATGTATCTG GCGGCCGCCG CCCTCTACTG GATCCTCTCC
AGCGTACTGG CCCTGGGCCA GGCCCGGTTG GAACGCCAGG CGGAGGGCCG CGGATGA
 
Protein sequence
MSAALDLIVQ SAPLLLKGAG YTVLLSLIGM GVGLVIGFGL ALMRLSRSPL LRWPAAIYVS 
AIRGTPLLVQ LFLIYYGLPQ LGVQLPPLLA AGIGFSINIG AYAGEILRSA IAAVDKGQWE
AASVLGMSRG QALRRVILPQ AARTAVAPLS NSFISLVKDT SLAATIQVPE LFRQAQLITA
RTYEIFAMYL AAAALYWILS SVLALGQARL ERQAEGRG