Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2722 |
Symbol | |
ID | 5900177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2957237 |
End bp | 2957989 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641563214 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001684347 |
Protein GI | 167646684 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.823935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGGACC CCGCCCTGGC CCGGCTGTTC TCGCTCGAAG GCAAGGTGGC CCTGGTCACC GGCGCCTCGC GGGGCATCGG CGCGGCGCTG GCCGACGGCC TGGCCGGCGC GGGAGGCAGC GTGATCGGGG TGGCGCGCTC GCCCGCGCCG CGCGAGGCGT TTGGCCATAC GATTCGCTAT GTGGCCGCCG ACATCGCGGC CGGGGTCGAG GCGCTGGTGG CCGATATCGT CGCCGAGCAT GGCCGGATCG ACGTCTTGGT CAACGCCGCC GGGGTCAGCC TGGCGGCCTC GTCCCCGGAC CAGGCCCTGG CCGCCTTCGA CGCGACGCTC GACATCAACC TGCGCGCCGC CTACGCCGCC TGTCTGGCGG TCGCGCCGCA CATGGAAAGC GGCGGTTCGA TCATCAACGT CACCAGCATC AACAGCCTGG TCGGCTTTCC CGGCAACCCC GGCTACGTGG CGGCCAAGGG CGGCCTGCGG ATGCTGACCA AGGCTCTGGC GGTCGACCTG GGACCGCGGG GCGTGCGGGT CAACGCCCTG GCGCCGGGCT ACATCCACAC CGACATGACC GCCGCCAGCT TCGCCGATCC CGAACGCCAT GCCGCTCGCG CCCGCCACAC CTGCCTGGGT CGATGGGGCG AGGTCGATGA CCTGGTGGGG GCGGCGATCT TCCTGGCCTC CGACGCCTCG CGCTACATGA CCGGCCAGGA TCTGGTGATC GACGGCGGCT GGACCGCCAA GGGGCTGGCA TGA
|
Protein sequence | MVDPALARLF SLEGKVALVT GASRGIGAAL ADGLAGAGGS VIGVARSPAP REAFGHTIRY VAADIAAGVE ALVADIVAEH GRIDVLVNAA GVSLAASSPD QALAAFDATL DINLRAAYAA CLAVAPHMES GGSIINVTSI NSLVGFPGNP GYVAAKGGLR MLTKALAVDL GPRGVRVNAL APGYIHTDMT AASFADPERH AARARHTCLG RWGEVDDLVG AAIFLASDAS RYMTGQDLVI DGGWTAKGLA
|
| |