Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2683 |
Symbol | |
ID | 5900138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2916985 |
End bp | 2917674 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641563174 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001684308 |
Protein GI | 167646645 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.606865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACT TGAGCCCTAC CGAAAAACTC CTTCGCACCT CCGAGCGCTG GAGCGCTTCC GGCCACGTCG TCGGCGGGGA GTCGCGCAGC TTCGCCCCAG CGTCCGACCC GGTCACCCCG GTGGAGGACC AGGCGTTCAG GCAGAGGCTG GTCGCCAGCA TCCCGATCCT CCGATCGTTC GCGCGCGGAC TCTGCGGCGA CGCGACCGTC GGCGACGATC TGGCTCAGGA TGCCCTGCTC AAGGCCTGGC AGTATCGCGC GCAGTTCACC CCGGGCACCA ACTTCAAGGG TTGGATCCTC AAGATCGCGC GCAACCATTT CTACTCGCAG CGACGCCGCG TCTGGCGCGA GGCGCCGCTG GACGAGGCCG TCGGCGCCCA GGTTCGCGCC ACGGGAGCCG ATCAGTTCCA GGCGCTGATG CTCAACGACC TCCGCAACGC CCTGAACGCT CTCAGCGACG AACAGCGCGA GGCCGCCATC CTGGTCGGCG CGGGCGGCTT CTCCCACCGG CAGGCGGCCG AGATGTGCGC CGTGCCGGAG GGCACGATGA AGAGCCGCGT CTGCCGGGCG CGAGCCAAGC TGGCCTTGCT GCTGGAGAAC GGCGACCTAA CCTACGACGC CGCGCCGGCC TCGCTGGCGG CTGGCTTGAT CATGGCCGAG CTGTCGGCCC TGTCCGACGC CCGAGGATAG
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Protein sequence | MKDLSPTEKL LRTSERWSAS GHVVGGESRS FAPASDPVTP VEDQAFRQRL VASIPILRSF ARGLCGDATV GDDLAQDALL KAWQYRAQFT PGTNFKGWIL KIARNHFYSQ RRRVWREAPL DEAVGAQVRA TGADQFQALM LNDLRNALNA LSDEQREAAI LVGAGGFSHR QAAEMCAVPE GTMKSRVCRA RAKLALLLEN GDLTYDAAPA SLAAGLIMAE LSALSDARG
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