Gene Caul_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2683 
Symbol 
ID5900138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2916985 
End bp2917674 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID641563174 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684308 
Protein GI167646645 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.606865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACT TGAGCCCTAC CGAAAAACTC CTTCGCACCT CCGAGCGCTG GAGCGCTTCC 
GGCCACGTCG TCGGCGGGGA GTCGCGCAGC TTCGCCCCAG CGTCCGACCC GGTCACCCCG
GTGGAGGACC AGGCGTTCAG GCAGAGGCTG GTCGCCAGCA TCCCGATCCT CCGATCGTTC
GCGCGCGGAC TCTGCGGCGA CGCGACCGTC GGCGACGATC TGGCTCAGGA TGCCCTGCTC
AAGGCCTGGC AGTATCGCGC GCAGTTCACC CCGGGCACCA ACTTCAAGGG TTGGATCCTC
AAGATCGCGC GCAACCATTT CTACTCGCAG CGACGCCGCG TCTGGCGCGA GGCGCCGCTG
GACGAGGCCG TCGGCGCCCA GGTTCGCGCC ACGGGAGCCG ATCAGTTCCA GGCGCTGATG
CTCAACGACC TCCGCAACGC CCTGAACGCT CTCAGCGACG AACAGCGCGA GGCCGCCATC
CTGGTCGGCG CGGGCGGCTT CTCCCACCGG CAGGCGGCCG AGATGTGCGC CGTGCCGGAG
GGCACGATGA AGAGCCGCGT CTGCCGGGCG CGAGCCAAGC TGGCCTTGCT GCTGGAGAAC
GGCGACCTAA CCTACGACGC CGCGCCGGCC TCGCTGGCGG CTGGCTTGAT CATGGCCGAG
CTGTCGGCCC TGTCCGACGC CCGAGGATAG
 
Protein sequence
MKDLSPTEKL LRTSERWSAS GHVVGGESRS FAPASDPVTP VEDQAFRQRL VASIPILRSF 
ARGLCGDATV GDDLAQDALL KAWQYRAQFT PGTNFKGWIL KIARNHFYSQ RRRVWREAPL
DEAVGAQVRA TGADQFQALM LNDLRNALNA LSDEQREAAI LVGAGGFSHR QAAEMCAVPE
GTMKSRVCRA RAKLALLLEN GDLTYDAAPA SLAAGLIMAE LSALSDARG