Gene Caul_2437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2437 
Symbol 
ID5899892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2659428 
End bp2661071 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content65% 
IMG OID641562928 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_001684062 
Protein GI167646399 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.645998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.705393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG TTTCCACCTT AGCCGCGCCG CCCAAGGGAG CCGGCGCGGT CCTGGTCCTG 
TCGATCGTCG GCGCCTTCCT GGCGCTGATG GCTGCGGGCC TGACCGAGGA TCCGATCTTT
CGGTTCCATG CCGAAATCGT CTTCCTGGCC GCCGTGCTCA GCGCCTTCTT CCTAACCGGA
GGGCTGTCCG GCGGAACTCT GCGCGACGCG CCCGACCGTT ACGCCGATGG CGTGATCAAG
GCCGGCGTGA TCGCCACCAT GTTCTGGGCG GCGGTCGGTC TGCTGGTCGG GGTGGTGATC
GCCAGTCAAC TGGCCTGGCC CAGGATCTTC TATTTTCCCG AGGCGGGGTG GCTCAACTTC
GGCCGTCTGC GACCGGTCCA CACCTCCGGC GTGATCTTCG CCTTCGGCGG CAACGCCCTG
ATCGCGACGT CCTTCTGGGT GGTGCAACGC ACCTGCAAGG CGCGCCTGGC CGGCGGTATC
GCCCCCTGGT TCGTGTTCTG GGGCTATCAA TTGTTCATCG TCCTGGCGGC CACCGGCTAT
CTCGCCGGCG CGACTCAGGG GCGCGAATAC GCCGAGCCCG AATGGTACGT CGATATCTGG
CTGACCATCG TCTGGGTCGT CTACCTGCTG GTGTTCCTGG GCACGATCTG GAAGCGGAAA
GAGCCCCACA TCTATGTGGC CAACTGGTTC TACCTGGCCT TCATCGTCAC CATCGCCCTG
CTGCACCTGG TCAGCAACGC CGCCGTGCCG GTCGGCATGT TGAACCACAA GTCTTACGGG
GTGTTCTCCG GCGTCCAGGA CGCCCTGGTC CAGTGGTGGT ACGGCCACAA CGCCGTCGGC
TTCTTCCTGA CCGCCGGCTT CCTGGGCATG ATGTACTACT TCGTGCCCAA GCGCGTGGAG
CGGCCGGTCT ACAGCTATCG CCTGTCGATC GTGCACTTCT GGGCGCTGAT CTTCATCTAC
ATCTGGGCCG GTCCGCACCA CCTGCACTAC ACGGCGCTGC CGCAGTGGGC CCAGACCCTG
GGCATGACCT TCTCGATCAT GCTGTGGATG CCCTCGTGGG GCGGCATGAT CAACGGGCTG
ATGACCCTGT CGGGCGCGTG GGACAAGCTG CGCACCGACC CGGTGGTCCG CATGATGGTG
GTCTCGATCG CCTTTTACGG CATGAGCACC TTCGAAGGTC CGGTGATGTC GATCCGCGCG
GTCAACGCGC TGTCGCACTA CACCGACTGG ACCATCGGCC ACGTGCACTC CGGCGCCCTG
GGATGGGTCG GCTTCATCAG CTTCGGAGCG GTCTACTGCA TGGTGCCGTG GCTGTGGAAG
AAGACGGCCA TCTACTCGAA CAAGCTGATC GAGTGGCACT TCTGGCTCGC GACCACCGGC
ATCCTTCTCT ACATCGCCGC GATGTGGGTG TCGGGCGTCA TGGAAGGCCT GATGTGGCGC
GAATACACGC CGCAGGGGTT CCTCGCCTGG AGCTTCATCG AGACCGTCTC GGCCAAGCAC
ATCGAGAACG TCATCCGGAT GGTCGGGGGT CTCATGTACC TCTCCGGCGC CCTGATCATG
ATCTTCAACC TCTGGCGCAC GGTCCAAATG CCGACCGTCG CCGAGCCCGC TGCTTCGGCC
GCGCCCGCCC TCGCGACCGC CTAA
 
Protein sequence
MSAVSTLAAP PKGAGAVLVL SIVGAFLALM AAGLTEDPIF RFHAEIVFLA AVLSAFFLTG 
GLSGGTLRDA PDRYADGVIK AGVIATMFWA AVGLLVGVVI ASQLAWPRIF YFPEAGWLNF
GRLRPVHTSG VIFAFGGNAL IATSFWVVQR TCKARLAGGI APWFVFWGYQ LFIVLAATGY
LAGATQGREY AEPEWYVDIW LTIVWVVYLL VFLGTIWKRK EPHIYVANWF YLAFIVTIAL
LHLVSNAAVP VGMLNHKSYG VFSGVQDALV QWWYGHNAVG FFLTAGFLGM MYYFVPKRVE
RPVYSYRLSI VHFWALIFIY IWAGPHHLHY TALPQWAQTL GMTFSIMLWM PSWGGMINGL
MTLSGAWDKL RTDPVVRMMV VSIAFYGMST FEGPVMSIRA VNALSHYTDW TIGHVHSGAL
GWVGFISFGA VYCMVPWLWK KTAIYSNKLI EWHFWLATTG ILLYIAAMWV SGVMEGLMWR
EYTPQGFLAW SFIETVSAKH IENVIRMVGG LMYLSGALIM IFNLWRTVQM PTVAEPAASA
APALATA