Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2250 |
Symbol | |
ID | 5899705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2444521 |
End bp | 2445039 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641562741 |
Product | Type IV secretory pathway protease TraF-like protein |
Protein accession | YP_001683875 |
Protein GI | 167646212 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4959] Type IV secretory pathway, protease TraF |
TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCG CCCGCAGCCT GCCGATGGCC GCGCTCACCG CCGCCGGATG CTTGTTGATC GGCTTGGGAG GGGGCGATCG CTTCGCGCCG CGCCTGCTGT TCAACACCAC GGCCAGCGCG CCCGTAGGCT TCTACAGCCT GGGTCCCGGA ACGCCCGTCG TGGGGGAGTG GGTGGCGATC ATGCCGCCAC CGGCCTTGGC GCGATGGATG GCGATCCGCC ACTACCTTCC CCTGAACGTG CCGCTTCTCA AGCAGGTGGC GGCGCTCCCG GGACAGGTGG TTTGCGGACA GGGCGGCGTC CTCCTGATCG ACGGCAAGCC GGTGGCGCGC GCGCGCCGGA AGGATCGGCG GGGCAGGGCG CTCACACCAT TCCGGGAATG CCGCCGTCTC CTCGCGGGCG AGATCATGCT CGTCAATGCG CAGCCCGACA GTCTCGACAG TCGCTATTTC GGGCCTCTCC CGGCCGACGG GGTCGTCGGC CGGGCCCGGC CACTCTGGAC GTGGACGGCG CGGAGATGA
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Protein sequence | MTAARSLPMA ALTAAGCLLI GLGGGDRFAP RLLFNTTASA PVGFYSLGPG TPVVGEWVAI MPPPALARWM AIRHYLPLNV PLLKQVAALP GQVVCGQGGV LLIDGKPVAR ARRKDRRGRA LTPFRECRRL LAGEIMLVNA QPDSLDSRYF GPLPADGVVG RARPLWTWTA RR
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