Gene Caul_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2250 
Symbol 
ID5899705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2444521 
End bp2445039 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID641562741 
ProductType IV secretory pathway protease TraF-like protein 
Protein accessionYP_001683875 
Protein GI167646212 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4959] Type IV secretory pathway, protease TraF 
TIGRFAM ID[TIGR02771] conjugative transfer signal peptidase TraF 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CCCGCAGCCT GCCGATGGCC GCGCTCACCG CCGCCGGATG CTTGTTGATC 
GGCTTGGGAG GGGGCGATCG CTTCGCGCCG CGCCTGCTGT TCAACACCAC GGCCAGCGCG
CCCGTAGGCT TCTACAGCCT GGGTCCCGGA ACGCCCGTCG TGGGGGAGTG GGTGGCGATC
ATGCCGCCAC CGGCCTTGGC GCGATGGATG GCGATCCGCC ACTACCTTCC CCTGAACGTG
CCGCTTCTCA AGCAGGTGGC GGCGCTCCCG GGACAGGTGG TTTGCGGACA GGGCGGCGTC
CTCCTGATCG ACGGCAAGCC GGTGGCGCGC GCGCGCCGGA AGGATCGGCG GGGCAGGGCG
CTCACACCAT TCCGGGAATG CCGCCGTCTC CTCGCGGGCG AGATCATGCT CGTCAATGCG
CAGCCCGACA GTCTCGACAG TCGCTATTTC GGGCCTCTCC CGGCCGACGG GGTCGTCGGC
CGGGCCCGGC CACTCTGGAC GTGGACGGCG CGGAGATGA
 
Protein sequence
MTAARSLPMA ALTAAGCLLI GLGGGDRFAP RLLFNTTASA PVGFYSLGPG TPVVGEWVAI 
MPPPALARWM AIRHYLPLNV PLLKQVAALP GQVVCGQGGV LLIDGKPVAR ARRKDRRGRA
LTPFRECRRL LAGEIMLVNA QPDSLDSRYF GPLPADGVVG RARPLWTWTA RR