Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2102 |
Symbol | |
ID | 5899557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2248811 |
End bp | 2249347 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641562591 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001683728 |
Protein GI | 167646065 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.488578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.604582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT CAAGTTGGGC CGGCCTGAGA GAGCGATTGC TCGACCGGTA TGACGATCTT GTTCGGCGAC TGTCCCGGCG TCTGGGATCG TCCGATCTCG CCCGTGAGGC GGTGCACGAG ACGTTCCTGC GACTCCAGCG CAGCGACGCG TCGGAACCCG TCAGAAACCT CGACGCCTAC CTTTTCCGCA CGGCGATTAA CATCGCCAAG AACCGTCACA AGGTCGAACG CCGCTATCTG ACCTTTTCTG AAACCGACAT GCTAATCGGC ATTCCCGACG ACTCTCCAGA CCCCGCGCGC ATCGCCGAAA GCCGCTCGGA GATGGCGTTG CTGTCGCGGG CGCTGGAAGA ACTGCCGCCG CGCCGTCGCG CGATCTTCGA GGCCTCTTGG GCTCACGGGG TCCCCCACGC GACCCTGGCC ATCGATCATG GCGTCCATCT TCGGACCATT CAGCGCGAGC TGGAATTGGC GGCCGAGCAT GTTCGGCGCT ATTGGAAAGA AAAAGATCGG TTTTCGCGTC GCGAATCCGA GCGCTAA
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Protein sequence | MSDSSWAGLR ERLLDRYDDL VRRLSRRLGS SDLAREAVHE TFLRLQRSDA SEPVRNLDAY LFRTAINIAK NRHKVERRYL TFSETDMLIG IPDDSPDPAR IAESRSEMAL LSRALEELPP RRRAIFEASW AHGVPHATLA IDHGVHLRTI QRELELAAEH VRRYWKEKDR FSRRESER
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