Gene Caul_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2102 
Symbol 
ID5899557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2248811 
End bp2249347 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID641562591 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683728 
Protein GI167646065 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.488578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.604582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT CAAGTTGGGC CGGCCTGAGA GAGCGATTGC TCGACCGGTA TGACGATCTT 
GTTCGGCGAC TGTCCCGGCG TCTGGGATCG TCCGATCTCG CCCGTGAGGC GGTGCACGAG
ACGTTCCTGC GACTCCAGCG CAGCGACGCG TCGGAACCCG TCAGAAACCT CGACGCCTAC
CTTTTCCGCA CGGCGATTAA CATCGCCAAG AACCGTCACA AGGTCGAACG CCGCTATCTG
ACCTTTTCTG AAACCGACAT GCTAATCGGC ATTCCCGACG ACTCTCCAGA CCCCGCGCGC
ATCGCCGAAA GCCGCTCGGA GATGGCGTTG CTGTCGCGGG CGCTGGAAGA ACTGCCGCCG
CGCCGTCGCG CGATCTTCGA GGCCTCTTGG GCTCACGGGG TCCCCCACGC GACCCTGGCC
ATCGATCATG GCGTCCATCT TCGGACCATT CAGCGCGAGC TGGAATTGGC GGCCGAGCAT
GTTCGGCGCT ATTGGAAAGA AAAAGATCGG TTTTCGCGTC GCGAATCCGA GCGCTAA
 
Protein sequence
MSDSSWAGLR ERLLDRYDDL VRRLSRRLGS SDLAREAVHE TFLRLQRSDA SEPVRNLDAY 
LFRTAINIAK NRHKVERRYL TFSETDMLIG IPDDSPDPAR IAESRSEMAL LSRALEELPP
RRRAIFEASW AHGVPHATLA IDHGVHLRTI QRELELAAEH VRRYWKEKDR FSRRESER