Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2060 |
Symbol | |
ID | 5899515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2198143 |
End bp | 2198730 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641562549 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001683686 |
Protein GI | 167646023 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0951622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCAATC CGACTTCGGC CCAGACGAAC TTTGAACGCG AGCTCGTCGC CCTGATCCCC CACCTGCGCG CCTTCGGCCG CTCGCTGACC GGCAACGCCA GCCACGGCGA CGACCTGGCC CAGGACGCCT TGGCCAAGGC CCTGGCCTCG AGAGCCTCCT ATACTCCGGG CACCAACATG AAGGCCTGGA CCTTCATGAT CCTGCGCAAC GTCTTCTATT CGGAAAAGCG CCGCTCGTGG CGGTCGTGCC CGCTCGACCC CGAGGTCGCC GAGCGCACGC TGGTGTCGGT GTCCAATCCG ACCGCCGCCC TGGAGCTGGA CGAACTGCGC CGGGCCCTGG ACATGCTGCC GCCCGACCAG CGCGAAGCGC TGATCCTGAT CGGCGCGGCG GGCATGTCCT ATGAAGAGGT GAGCGACGTC ACCGGCGCCG CGATCGGCAC CATCAAGAGC CGCGTCAGCC GGGCGCGCGA CCGTCTGGCC CTGATCTTCG CCGAAGGCCA GATCAACGAG GACCATCAGC CGGCCCACGC CGCCATGGCC GCGATCTTCC AACGCATCGA CGGCTACCGT CTGGCGCGCG CCGCCTAG
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Protein sequence | MTNPTSAQTN FERELVALIP HLRAFGRSLT GNASHGDDLA QDALAKALAS RASYTPGTNM KAWTFMILRN VFYSEKRRSW RSCPLDPEVA ERTLVSVSNP TAALELDELR RALDMLPPDQ REALILIGAA GMSYEEVSDV TGAAIGTIKS RVSRARDRLA LIFAEGQINE DHQPAHAAMA AIFQRIDGYR LARAA
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