Gene Caul_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2060 
Symbol 
ID5899515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2198143 
End bp2198730 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID641562549 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683686 
Protein GI167646023 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0951622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAATC CGACTTCGGC CCAGACGAAC TTTGAACGCG AGCTCGTCGC CCTGATCCCC 
CACCTGCGCG CCTTCGGCCG CTCGCTGACC GGCAACGCCA GCCACGGCGA CGACCTGGCC
CAGGACGCCT TGGCCAAGGC CCTGGCCTCG AGAGCCTCCT ATACTCCGGG CACCAACATG
AAGGCCTGGA CCTTCATGAT CCTGCGCAAC GTCTTCTATT CGGAAAAGCG CCGCTCGTGG
CGGTCGTGCC CGCTCGACCC CGAGGTCGCC GAGCGCACGC TGGTGTCGGT GTCCAATCCG
ACCGCCGCCC TGGAGCTGGA CGAACTGCGC CGGGCCCTGG ACATGCTGCC GCCCGACCAG
CGCGAAGCGC TGATCCTGAT CGGCGCGGCG GGCATGTCCT ATGAAGAGGT GAGCGACGTC
ACCGGCGCCG CGATCGGCAC CATCAAGAGC CGCGTCAGCC GGGCGCGCGA CCGTCTGGCC
CTGATCTTCG CCGAAGGCCA GATCAACGAG GACCATCAGC CGGCCCACGC CGCCATGGCC
GCGATCTTCC AACGCATCGA CGGCTACCGT CTGGCGCGCG CCGCCTAG
 
Protein sequence
MTNPTSAQTN FERELVALIP HLRAFGRSLT GNASHGDDLA QDALAKALAS RASYTPGTNM 
KAWTFMILRN VFYSEKRRSW RSCPLDPEVA ERTLVSVSNP TAALELDELR RALDMLPPDQ
REALILIGAA GMSYEEVSDV TGAAIGTIKS RVSRARDRLA LIFAEGQINE DHQPAHAAMA
AIFQRIDGYR LARAA