Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1990 |
Symbol | |
ID | 5899445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2140526 |
End bp | 2141062 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641562479 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001683616 |
Protein GI | 167645953 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.730289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCCGC TCAACGCTCA ACGCGTCGTC CCCGACGACG ACGCCCCGCC CCCCTCCCAG CCAGCGGCTC CCCAGCCGCC CCTGGCCGAC GAGTACCTGC GCCACCGCGC CTGGCTGACG GCGGCGCTGA CGCGGCGCTA TGGTTCAGAC GCGGCCGACG ACATCGCCCA GGACACCTGG CTGCGGGTCC GCGGCTATGT CCCACCCGCC CCGATCCGCC GCCCCAAGTC GATGCTGATG CGCATCGCCC TGAACCTGGC GTCCAACCAT CGTCGCAAGG CGGCCCGCGA GGCGCCCACC GATCCGCAGG ACTGGACCTT CGATCGACGG AGTACGGAGG GCGACCAGGA CGCGGCGGTG ATTTTTGAAC AGATGTTGCT CGCCTTACCG CCAAAGTTGC GCGATGTTTT CTACCTGACC CATGTCGAGC AAAAGACCTA CGCGGAGATC GCGGCGCTGC TGGGGATCTC GCTGGGAGCG GTGGAAAAGC GGATGAGACA GGCAGTCGCC CAATGCGCCG ACTTCATCGG GAGCTAG
|
Protein sequence | MPPLNAQRVV PDDDAPPPSQ PAAPQPPLAD EYLRHRAWLT AALTRRYGSD AADDIAQDTW LRVRGYVPPA PIRRPKSMLM RIALNLASNH RRKAAREAPT DPQDWTFDRR STEGDQDAAV IFEQMLLALP PKLRDVFYLT HVEQKTYAEI AALLGISLGA VEKRMRQAVA QCADFIGS
|
| |