Gene Caul_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1990 
Symbol 
ID5899445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2140526 
End bp2141062 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID641562479 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683616 
Protein GI167645953 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.730289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCGC TCAACGCTCA ACGCGTCGTC CCCGACGACG ACGCCCCGCC CCCCTCCCAG 
CCAGCGGCTC CCCAGCCGCC CCTGGCCGAC GAGTACCTGC GCCACCGCGC CTGGCTGACG
GCGGCGCTGA CGCGGCGCTA TGGTTCAGAC GCGGCCGACG ACATCGCCCA GGACACCTGG
CTGCGGGTCC GCGGCTATGT CCCACCCGCC CCGATCCGCC GCCCCAAGTC GATGCTGATG
CGCATCGCCC TGAACCTGGC GTCCAACCAT CGTCGCAAGG CGGCCCGCGA GGCGCCCACC
GATCCGCAGG ACTGGACCTT CGATCGACGG AGTACGGAGG GCGACCAGGA CGCGGCGGTG
ATTTTTGAAC AGATGTTGCT CGCCTTACCG CCAAAGTTGC GCGATGTTTT CTACCTGACC
CATGTCGAGC AAAAGACCTA CGCGGAGATC GCGGCGCTGC TGGGGATCTC GCTGGGAGCG
GTGGAAAAGC GGATGAGACA GGCAGTCGCC CAATGCGCCG ACTTCATCGG GAGCTAG
 
Protein sequence
MPPLNAQRVV PDDDAPPPSQ PAAPQPPLAD EYLRHRAWLT AALTRRYGSD AADDIAQDTW 
LRVRGYVPPA PIRRPKSMLM RIALNLASNH RRKAAREAPT DPQDWTFDRR STEGDQDAAV
IFEQMLLALP PKLRDVFYLT HVEQKTYAEI AALLGISLGA VEKRMRQAVA QCADFIGS