Gene Caul_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1968 
Symbol 
ID5899423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2111346 
End bp2112356 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content72% 
IMG OID641562458 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001683595 
Protein GI167645932 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.629928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACATT CCCCCGCTCC AACTCCGCCG TTCGAAGACG TTCACGAGGC GGCCGCCGCC 
TGGTGGATGC GCCAGGTCTC CGACGATTGG ACCGACGCCG ACCAAGCCGG GTTGCAAGCC
TGGCTGGCCG CGGACGCGCG CCATGCGGAC GCCTACGGCC AGGTGCTGGA GGCGATGTCC
GCGTTCGATG ATCAGGACGA CGCCGCCGAT CTCCGGGCTT TGCGCCAACA GCTCCAAGAC
AGCGCGGCCC CGCTTCCCGG CGCGCGACGT TCGTCCCCGC GCCCTTCGCG GCGCGCCTGG
ATGATCGGCG CGGGCGCCCT GGCCGCCGGC CTCGTGGGCT TTGGGGTGCT GAGCCGCCCC
TCACCCGCGC GGATCTACAT CGCCCCCGCG GGCGCCCCGG CCGAGTTCAA CCTGGCCGAT
GGCTCGCGTC TGTCGATCGA GGGCGGCGGC GCGGTCGCGG TGCGGCTTGG CCGTCACGCC
AGGGACCTGG AACTGACCCG CGGCCAGGCC CGCTTCGAGG TCGCGCACGA CAAGGCGCGG
CCCTTCTCGG TCACCGTCGG CGACCAGGTC GTGGTGGCCA CCGGGACGAT GTTCAACATC
GATCGGTTGA GCGAGCGCTC CGTCGTCAGC CTGTTGGAGG GGCGGGTCAT CATCCACCCG
GTCCGGGGCG AGGGCCCGAC CCTGGTTCTG GCGCCGGGAG AGCAAGCCGT GCTGCGCCCC
GGAAGCCTGC CCCTGCGCCA GACGGCCGAT GTGCGTTCGG CCGCGGCCTG GAGGAACGGG
CGCTTGATCT TCGATGACAC GCCGCTCGCC GAAGCCGTCG AACGGGTCAA TCGTTATGGC
GCCAATCTTC GCCTGGGCGA CGAAGCCTTG GCCCGCTTGC GGGTGACCGG GGTGTTCAAG
GCCGGCGACA ACGCCGCCTT CGTCGAGGCG ATCACCGCCT ATCTCCCCAT CGCGGCGCGA
CGCGGCGCCG ATGGGCGCAC CGCGCTGGTT CAACGCCCCG CCGGGGGTTA G
 
Protein sequence
MTHSPAPTPP FEDVHEAAAA WWMRQVSDDW TDADQAGLQA WLAADARHAD AYGQVLEAMS 
AFDDQDDAAD LRALRQQLQD SAAPLPGARR SSPRPSRRAW MIGAGALAAG LVGFGVLSRP
SPARIYIAPA GAPAEFNLAD GSRLSIEGGG AVAVRLGRHA RDLELTRGQA RFEVAHDKAR
PFSVTVGDQV VVATGTMFNI DRLSERSVVS LLEGRVIIHP VRGEGPTLVL APGEQAVLRP
GSLPLRQTAD VRSAAAWRNG RLIFDDTPLA EAVERVNRYG ANLRLGDEAL ARLRVTGVFK
AGDNAAFVEA ITAYLPIAAR RGADGRTALV QRPAGG